Cow genome map
| Conread name: | rspc005_e14.y1 |
| Conread position: | 1-267 |
| Cow position: | chr1:91595683-91595411 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 16 |
| Conread position: | 1-279 |
| Cow position: | chr1:48685995-48685724 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 232, 155 |
| Conread position: | 1-313 |
| Cow position: | chr1:23578733-23578411 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 168, 184 |
| Conread position: | 1-313 |
| Cow position: | chr1:65726613-65726301 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 202, 65 |
| Conread position: | 1-319 |
| Cow position: | chr1:97047818-97047504 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 177, 44 |
| Conread position: | 1-326 |
| Cow position: | chr1:81868404-81868067 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 102 |
| Conread position: | 1-329 |
| Cow position: | chr1:34362730-34363057 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 44 |
| Conread position: | 1-329 |
| Cow position: | chr1:37762086-37761756 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 1-329 |
| Cow position: | chr1:50939951-50939613 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 287 |
| Conread position: | 1-334 |
| Cow position: | chr1:44701712-44701363 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 1-336 |
| Cow position: | chr1:2181191-2181539 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 30 |
| Conread position: | 3-321 |
| Cow position: | chr1:71017276-71016944 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 177 |
| Conread position: | 3-328 |
| Cow position: | chr1:66775514-66775849 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 166, 15 |
| Conread position: | 4-281 |
| Cow position: | chr1:84252758-84252456 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 8-327 |
| Cow position: | chr1:57670036-57669724 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 251, 166 |
| Conread position: | 9-321 |
| Cow position: | chr1:50257585-50257899 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 147 |
| Conread position: | 9-328 |
| Cow position: | chr1:44677752-44678071 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 160, 14 |
| Conread position: | 9-336 |
| Cow position: | chr1:82486661-82486993 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 105, 36 |
| Conread position: | 11-321 |
| Cow position: | chr1:51893310-51892998 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 158, 259 |
| Conread position: | 37-332 |
| Cow position: | chr1:65031705-65031402 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 39-336 |
| Cow position: | chr1:64698201-64698497 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 216, 117 |
| Conread position: | 42-334 |
| Cow position: | chr1:42821090-42821390 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 45-295 |
| Cow position: | chr1:56856952-56857211 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 124, 6 |
| Conread position: | 46-336 |
| Cow position: | chr1:35246439-35246742 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 104 |
| Conread position: | 57-335 |
| Cow position: | chr1:5364107-5364398 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 83, 101 |
| Conread position: | 91-336 |
| Cow position: | chr1:93948503-93948244 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 78, 215 |
| Conread position: | 93-321 |
| Cow position: | chr1:94707099-94706864 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 117-329 |
| Cow position: | chr1:34859421-34859198 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 194 |
| Conread position: | 127-289 |
| Cow position: | chr1:51984272-51984443 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 132-336 |
| Cow position: | chr1:81838162-81837946 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 18 |
Show alignments to all cow chromosomes.