Cow genome map
| Conread name: | rspc005_e14.y1 |
| Conread position: | 1-274 |
| Cow position: | chr11:74192602-74192316 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 1-278 |
| Cow position: | chr11:45652179-45651892 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 1-317 |
| Cow position: | chr11:35570478-35570166 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 168, 203 |
| Conread position: | 1-333 |
| Cow position: | chr11:54367475-54367168 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 130, 44 |
| Conread position: | 1-335 |
| Cow position: | chr11:2951354-2951011 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 162 |
| Conread position: | 1-336 |
| Cow position: | chr11:20805117-20804780 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 176, 79 |
| Conread position: | 1-336 |
| Cow position: | chr11:51423679-51423351 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 79 |
| Conread position: | 2-318 |
| Cow position: | chr11:13454528-13454206 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 2-329 |
| Cow position: | chr11:57755188-57754865 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 2-330 |
| Cow position: | chr11:17452803-17453132 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 112, 46 |
| Conread position: | 5-333 |
| Cow position: | chr11:73039318-73039625 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 304, 60 |
| Conread position: | 8-318 |
| Cow position: | chr11:3368258-3367937 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 8-329 |
| Cow position: | chr11:33863361-33863028 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 9-333 |
| Cow position: | chr11:42366038-42366367 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 280 |
| Conread position: | 9-334 |
| Cow position: | chr11:2323132-2322811 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 211, 20 |
| Conread position: | 16-326 |
| Cow position: | chr11:42229311-42229635 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 35-326 |
| Cow position: | chr11:48293578-48293879 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 56-336 |
| Cow position: | chr11:45549918-45550203 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 124, 59 |
| Conread position: | 60-336 |
| Cow position: | chr11:54566966-54567257 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 61-336 |
| Cow position: | chr11:61486019-61485733 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 67-318 |
| Cow position: | chr11:35956623-35956882 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 102, 54 |
| Conread position: | 69-336 |
| Cow position: | chr11:31892742-31893023 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 63, 238 |
| Conread position: | 71-336 |
| Cow position: | chr11:30226283-30226009 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 96, 53 |
| Conread position: | 72-272 |
| Cow position: | chr11:62787479-62787684 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 125, 38 |
| Conread position: | 72-336 |
| Cow position: | chr11:36453848-36453583 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 68, 113 |
| Conread position: | 77-336 |
| Cow position: | chr11:38737187-38736928 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 87-330 |
| Cow position: | chr11:2541944-2542204 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 82, 208 |
| Conread position: | 96-255 |
| Cow position: | chr11:50137039-50136871 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 112-336 |
| Cow position: | chr11:75360994-75360757 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 57, 194 |
| Conread position: | 120-323 |
| Cow position: | chr11:73327951-73328153 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 120-328 |
| Cow position: | chr11:40351203-40350987 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 123-329 |
| Cow position: | chr11:49981850-49982070 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 128-321 |
| Cow position: | chr11:12147951-12148152 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 109 |
| Conread position: | 134-326 |
| Cow position: | chr11:53855404-53855608 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 176 |
| Conread position: | 169-336 |
| Cow position: | chr11:9167108-9166929 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.