Cow genome map
| Conread name: | rspc005_e14.y1 |
| Conread position: | 1-295 |
| Cow position: | chr2:3768895-3768600 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 22 |
| Conread position: | 1-314 |
| Cow position: | chr2:39692557-39692872 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 172, 41 |
| Conread position: | 1-336 |
| Cow position: | chr2:853085-852735 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 26 |
| Conread position: | 1-336 |
| Cow position: | chr2:78645619-78645263 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 1-336 |
| Cow position: | chr2:79907736-79907393 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 2-254 |
| Cow position: | chr2:78518477-78518725 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 170, 13 |
| Conread position: | 2-316 |
| Cow position: | chr2:64525073-64525397 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 60 |
| Conread position: | 2-332 |
| Cow position: | chr2:1957486-1957817 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 167, 15 |
| Conread position: | 2-336 |
| Cow position: | chr2:62435964-62435619 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 2-337 |
| Cow position: | chr2:44057246-44056902 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 152, 49 |
| Conread position: | 3-271 |
| Cow position: | chr2:44616141-44616422 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 4-336 |
| Cow position: | chr2:60946362-60946720 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 101, 41 |
| Conread position: | 8-294 |
| Cow position: | chr2:43868409-43868704 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 9-161 |
| Cow position: | chr2:82374946-82374797 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 40 |
| Conread position: | 10-321 |
| Cow position: | chr2:57699516-57699839 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 295 |
| Conread position: | 12-287 |
| Cow position: | chr2:52653532-52653822 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 128, 215 |
| Conread position: | 12-336 |
| Cow position: | chr2:4699318-4699650 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 157, 56 |
| Conread position: | 13-317 |
| Cow position: | chr2:76827729-76828019 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 249, 124 |
| Conread position: | 15-296 |
| Cow position: | chr2:16099449-16099155 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 34, 210 |
| Conread position: | 26-308 |
| Cow position: | chr2:56463363-56463640 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 233, 40 |
| Conread position: | 35-278 |
| Cow position: | chr2:34053194-34052934 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 44, 159 |
| Conread position: | 48-337 |
| Cow position: | chr2:871633-871330 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 102 |
| Conread position: | 49-336 |
| Cow position: | chr2:72646723-72646434 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 14 |
| Conread position: | 55-336 |
| Cow position: | chr2:15215192-15215461 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 114, 56 |
| Conread position: | 57-314 |
| Cow position: | chr2:38560936-38561193 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 57-336 |
| Cow position: | chr2:42656340-42656625 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 112, 56 |
| Conread position: | 61-329 |
| Cow position: | chr2:16562681-16562947 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 109, 83 |
| Conread position: | 73-336 |
| Cow position: | chr2:20554729-20554459 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 30 |
| Conread position: | 74-316 |
| Cow position: | chr2:2714575-2714828 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 5, 201 |
| Conread position: | 74-329 |
| Cow position: | chr2:43929610-43929855 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 89-299 |
| Cow position: | chr2:39606299-39606080 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 211 |
| Conread position: | 92-336 |
| Cow position: | chr2:64447394-64447156 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 102-336 |
| Cow position: | chr2:76985805-76985566 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 67, 164 |
| Conread position: | 106-295 |
| Cow position: | chr2:1837802-1837608 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 106-336 |
| Cow position: | chr2:1369755-1369997 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 131-337 |
| Cow position: | chr2:42206822-42206601 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 141-327 |
| Cow position: | chr2:22669954-22669768 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 160 |
Show alignments to all cow chromosomes.