Cow genome map


           Conread name:
           rspc005_e14.y1
        

               Conread position:
               1-321
               

               Cow position:
               chr23:9607917-9608230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               169, 68
               

               Conread position:
               1-334
               

               Cow position:
               chr23:36676126-36675788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 119
               

               Conread position:
               1-336
               

               Cow position:
               chr23:15351230-15351565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               168, 75
               

               Conread position:
               8-327
               

               Cow position:
               chr23:8389104-8388783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               161, 55
               

               Conread position:
               9-328
               

               Cow position:
               chr23:35275254-35275588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               9-329
               

               Cow position:
               chr23:9542811-9542481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 294
               

               Conread position:
               10-333
               

               Cow position:
               chr23:8322791-8323128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               160, 127
               

               Conread position:
               36-321
               

               Cow position:
               chr23:20389969-20389673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               133, 269
               

               Conread position:
               57-273
               

               Cow position:
               chr23:15657765-15657537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               79-313
               

               Cow position:
               chr23:22873656-22873409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 234
               

               Conread position:
               97-271
               

               Cow position:
               chr23:11088900-11088717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               207-329
               

               Cow position:
               chr23:26541873-26541751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               54, 94
               
Show alignments to all cow chromosomes.