Cow genome map
| Conread name: | rspc005_e14.y1 |
| Conread position: | 1-272 |
| Cow position: | chr3:58026062-58025782 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 85 |
| Conread position: | 1-285 |
| Cow position: | chr3:70096999-70096694 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 1-299 |
| Cow position: | chr3:14881575-14881261 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 140, 24 |
| Conread position: | 1-313 |
| Cow position: | chr3:31383999-31383695 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 168, 50 |
| Conread position: | 1-336 |
| Cow position: | chr3:322902-322568 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 22 |
| Conread position: | 1-336 |
| Cow position: | chr3:16884348-16884021 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 81 |
| Conread position: | 1-336 |
| Cow position: | chr3:19831204-19830861 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 1-336 |
| Cow position: | chr3:51068953-51068614 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 43, 249 |
| Conread position: | 1-337 |
| Cow position: | chr3:57977599-57977257 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 246 |
| Conread position: | 2-294 |
| Cow position: | chr3:45615290-45615585 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 167, 115 |
| Conread position: | 2-313 |
| Cow position: | chr3:66847439-66847133 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 68, 112 |
| Conread position: | 3-336 |
| Cow position: | chr3:24456064-24455733 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 9-336 |
| Cow position: | chr3:36170977-36170646 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 11-336 |
| Cow position: | chr3:63139302-63138978 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 90, 48 |
| Conread position: | 18-336 |
| Cow position: | chr3:27091217-27090896 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 42 |
| Conread position: | 18-336 |
| Cow position: | chr3:82930034-82930348 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 151, 113 |
| Conread position: | 24-307 |
| Cow position: | chr3:48995735-48996031 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 79, 21 |
| Conread position: | 29-313 |
| Cow position: | chr3:42993900-42993603 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 29-336 |
| Cow position: | chr3:27515253-27515569 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 152 |
| Conread position: | 36-329 |
| Cow position: | chr3:10891745-10892049 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 127, 65 |
| Conread position: | 49-259 |
| Cow position: | chr3:83911316-83911546 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 57-318 |
| Cow position: | chr3:11659456-11659729 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 92 |
| Conread position: | 57-329 |
| Cow position: | chr3:80580049-80580326 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 146, 61 |
| Conread position: | 74-328 |
| Cow position: | chr3:57593918-57594190 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 74-336 |
| Cow position: | chr3:16635015-16635269 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 95, 176 |
| Conread position: | 76-328 |
| Cow position: | chr3:49165379-49165117 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 104, 32 |
| Conread position: | 95-336 |
| Cow position: | chr3:65204753-65204512 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 96-336 |
| Cow position: | chr3:16716786-16716539 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 140-336 |
| Cow position: | chr3:27674628-27674423 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 117 |
Show alignments to all cow chromosomes.