Cow genome map


           Conread name:
           rspl23_p19.y1
        

               Conread position:
               1-118
               

               Cow position:
               chr3:39963848-39963963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               109, 13
               

               Conread position:
               1-131
               

               Cow position:
               chr3:12130001-12129866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr3:81267300-81267484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 136
               

               Conread position:
               2-113
               

               Cow position:
               chr3:83489057-83488946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               2-115
               

               Cow position:
               chr3:74540730-74540842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr3:59559979-59559793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               155
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               11, 135
               

               Conread position:
               10-183
               

               Cow position:
               chr3:66133359-66133181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 127
               

               Conread position:
               22-182
               

               Cow position:
               chr3:58244802-58244968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 116
               

               Conread position:
               31-183
               

               Cow position:
               chr3:39155478-39155635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               70, 106
               

               Conread position:
               36-186
               

               Cow position:
               chr3:23086738-23086889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 96
               
Show alignments to all cow chromosomes.