Cow genome map
Conread name: | rspl32_c12.y1 |
Conread position: | 25-436 |
Cow position: | chr11:57754493-57754075 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 6 |
Conread position: | 31-279 |
Cow position: | chr11:35861919-35861672 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 187 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 96, 21 |
Conread position: | 31-289 |
Cow position: | chr11:8494238-8494493 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 192 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 97, 60 |
Conread position: | 31-441 |
Cow position: | chr11:25809013-25808599 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 67 |
Conread position: | 31-442 |
Cow position: | chr11:1667357-1667773 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 67 |
Conread position: | 50-284 |
Cow position: | chr11:20494349-20494121 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 156 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 50-435 |
Cow position: | chr11:15495142-15495533 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 41 |
Conread position: | 50-442 |
Cow position: | chr11:27725147-27724750 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 41 |
Conread position: | 50-442 |
Cow position: | chr11:60824529-60824925 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 41 |
Conread position: | 51-276 |
Cow position: | chr11:13045001-13044793 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 161 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 51-299 |
Cow position: | chr11:14734648-14734390 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 195 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 116, 42 |
Conread position: | 51-299 |
Cow position: | chr11:60757219-60756978 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 182 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 51-375 |
Cow position: | chr11:52127964-52128295 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 49 |
Conread position: | 51-401 |
Cow position: | chr11:73137346-73137702 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 40 |
Conread position: | 51-411 |
Cow position: | chr11:417718-417351 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 40 |
Conread position: | 51-411 |
Cow position: | chr11:15835671-15836032 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 40 |
Conread position: | 51-414 |
Cow position: | chr11:2285468-2285837 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 40 |
Conread position: | 51-414 |
Cow position: | chr11:12177842-12178212 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 41 |
Conread position: | 51-414 |
Cow position: | chr11:19061319-19060950 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 40 |
Conread position: | 51-414 |
Cow position: | chr11:35242115-35241745 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 42 |
Conread position: | 51-414 |
Cow position: | chr11:38574728-38574361 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 19 |
Conread position: | 51-414 |
Cow position: | chr11:41314051-41314419 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 40 |
Conread position: | 51-414 |
Cow position: | chr11:58136472-58136841 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 40 |
Conread position: | 51-414 |
Cow position: | chr11:61397860-61397497 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 40 |
Conread position: | 51-442 |
Cow position: | chr11:2835020-2835416 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 26 |
Conread position: | 51-442 |
Cow position: | chr11:9388091-9388489 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 44 |
Conread position: | 51-442 |
Cow position: | chr11:10958586-10958980 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 26 |
Conread position: | 51-442 |
Cow position: | chr11:11990753-11991151 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 42 |
Conread position: | 51-442 |
Cow position: | chr11:17998176-17997783 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 19 |
Conread position: | 51-442 |
Cow position: | chr11:19099731-19099333 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 42 |
Conread position: | 51-442 |
Cow position: | chr11:25759508-25759893 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 51-442 |
Cow position: | chr11:30255185-30255590 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 0 |
Conread position: | 51-442 |
Cow position: | chr11:35142577-35142181 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 40 |
Conread position: | 51-442 |
Cow position: | chr11:40486913-40487305 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 43 |
Conread position: | 51-442 |
Cow position: | chr11:44106431-44106834 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 51-442 |
Cow position: | chr11:44254829-44255225 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 42 |
Conread position: | 51-442 |
Cow position: | chr11:51034044-51034427 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 40 |
Conread position: | 51-442 |
Cow position: | chr11:61426449-61426826 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 40 |
Conread position: | 51-442 |
Cow position: | chr11:74928558-74928948 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 53 |
Conread position: | 51-443 |
Cow position: | chr11:82346385-82345976 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 49 |
Conread position: | 52-411 |
Cow position: | chr11:84966870-84967229 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 39 |
Conread position: | 55-442 |
Cow position: | chr11:26593018-26592626 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 36 |
Conread position: | 55-442 |
Cow position: | chr11:39151357-39151751 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 38 |
Conread position: | 72-442 |
Cow position: | chr11:3238077-3238453 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 19 |
Conread position: | 72-442 |
Cow position: | chr11:83000805-83001180 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 19 |
Conread position: | 101-434 |
Cow position: | chr11:13062605-13062263 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 207 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 175, 0 |
Conread position: | 103-442 |
Cow position: | chr11:74990424-74990772 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 0 |
Conread position: | 106-442 |
Cow position: | chr11:46781261-46780918 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 96 |
Conread position: | 114-442 |
Cow position: | chr11:23494566-23494897 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 261 |
Conread position: | 116-442 |
Cow position: | chr11:7229177-7229512 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 0 |
Conread position: | 116-442 |
Cow position: | chr11:46583591-46583260 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 229 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 159, 94 |
Conread position: | 133-412 |
Cow position: | chr11:44875312-44875599 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 191 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 144, 59 |
Conread position: | 134-442 |
Cow position: | chr11:15988123-15988439 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 312 |
Conread position: | 186-442 |
Cow position: | chr11:56227816-56228081 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 199 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 92, 152 |
Conread position: | 209-442 |
Cow position: | chr11:21372171-21371929 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 178 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.