Cow genome map

Conread name: rspl32_c12.y1

Conread position: 25-436
Cow position: chr11:57754493-57754075 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 31-279
Cow position: chr11:35861919-35861672 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 96, 21

Conread position: 31-289
Cow position: chr11:8494238-8494493 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 97, 60

Conread position: 31-441
Cow position: chr11:25809013-25808599 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 67

Conread position: 31-442
Cow position: chr11:1667357-1667773 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 67

Conread position: 50-284
Cow position: chr11:20494349-20494121 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 50-435
Cow position: chr11:15495142-15495533 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 41

Conread position: 50-442
Cow position: chr11:27725147-27724750 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 41

Conread position: 50-442
Cow position: chr11:60824529-60824925 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 41

Conread position: 51-276
Cow position: chr11:13045001-13044793 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 51-299
Cow position: chr11:14734648-14734390 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 116, 42

Conread position: 51-299
Cow position: chr11:60757219-60756978 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 51-375
Cow position: chr11:52127964-52128295 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 49

Conread position: 51-401
Cow position: chr11:73137346-73137702 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 40

Conread position: 51-411
Cow position: chr11:417718-417351 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-411
Cow position: chr11:15835671-15836032 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr11:2285468-2285837 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr11:12177842-12178212 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 41

Conread position: 51-414
Cow position: chr11:19061319-19060950 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr11:35242115-35241745 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 51-414
Cow position: chr11:38574728-38574361 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 51-414
Cow position: chr11:41314051-41314419 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr11:58136472-58136841 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr11:61397860-61397497 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr11:2835020-2835416 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 26

Conread position: 51-442
Cow position: chr11:9388091-9388489 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 44

Conread position: 51-442
Cow position: chr11:10958586-10958980 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 26

Conread position: 51-442
Cow position: chr11:11990753-11991151 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr11:17998176-17997783 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 19

Conread position: 51-442
Cow position: chr11:19099731-19099333 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 42

Conread position: 51-442
Cow position: chr11:25759508-25759893 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 51-442
Cow position: chr11:30255185-30255590 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 51-442
Cow position: chr11:35142577-35142181 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr11:40486913-40487305 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 43

Conread position: 51-442
Cow position: chr11:44106431-44106834 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 51-442
Cow position: chr11:44254829-44255225 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr11:51034044-51034427 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-442
Cow position: chr11:61426449-61426826 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 51-442
Cow position: chr11:74928558-74928948 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 53

Conread position: 51-443
Cow position: chr11:82346385-82345976 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 49

Conread position: 52-411
Cow position: chr11:84966870-84967229 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 55-442
Cow position: chr11:26593018-26592626 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 36

Conread position: 55-442
Cow position: chr11:39151357-39151751 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 38

Conread position: 72-442
Cow position: chr11:3238077-3238453 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 19

Conread position: 72-442
Cow position: chr11:83000805-83001180 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 19

Conread position: 101-434
Cow position: chr11:13062605-13062263 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 175, 0

Conread position: 103-442
Cow position: chr11:74990424-74990772 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 106-442
Cow position: chr11:46781261-46780918 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 96

Conread position: 114-442
Cow position: chr11:23494566-23494897 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 261

Conread position: 116-442
Cow position: chr11:7229177-7229512 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 116-442
Cow position: chr11:46583591-46583260 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 159, 94

Conread position: 133-412
Cow position: chr11:44875312-44875599 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 144, 59

Conread position: 134-442
Cow position: chr11:15988123-15988439 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 312

Conread position: 186-442
Cow position: chr11:56227816-56228081 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 152

Conread position: 209-442
Cow position: chr11:21372171-21371929 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 66, 0

Show alignments to all cow chromosomes.