Cow genome map
| Conread name: | rspl32_c12.y1 |
| Conread position: | 14-267 |
| Cow position: | chr12:34176367-34176616 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 30-442 |
| Cow position: | chr12:26823145-26823553 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 276 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 31-278 |
| Cow position: | chr12:19861700-19861932 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 31-441 |
| Cow position: | chr12:8773679-8774098 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 31-442 |
| Cow position: | chr12:25313700-25313278 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 68 |
| Conread position: | 51-267 |
| Cow position: | chr12:29128323-29128111 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 51-267 |
| Cow position: | chr12:45145091-45145304 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 51-364 |
| Cow position: | chr12:42232348-42232667 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-399 |
| Cow position: | chr12:1407870-1408210 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-414 |
| Cow position: | chr12:23138290-23137921 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr12:35548088-35547724 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr12:46112079-46111710 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr12:10931124-10931521 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 42 |
| Conread position: | 51-442 |
| Cow position: | chr12:12755116-12754722 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 25 |
| Conread position: | 51-442 |
| Cow position: | chr12:18585711-18586108 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr12:25266294-25265899 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr12:41338192-41337797 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 19 |
| Conread position: | 51-442 |
| Cow position: | chr12:43681043-43681440 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 42 |
| Conread position: | 51-443 |
| Cow position: | chr12:8839291-8839690 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 39 |
| Conread position: | 52-414 |
| Cow position: | chr12:14423389-14423757 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 39 |
| Conread position: | 53-442 |
| Cow position: | chr12:30501681-30502068 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 40 |
| Conread position: | 55-442 |
| Cow position: | chr12:30141472-30141852 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 72-414 |
| Cow position: | chr12:22517792-22517447 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 19 |
| Conread position: | 72-442 |
| Cow position: | chr12:5226308-5226669 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 203, 21 |
| Conread position: | 108-443 |
| Cow position: | chr12:5165474-5165822 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 117-442 |
| Cow position: | chr12:36213380-36213713 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 64 |
| Conread position: | 187-392 |
| Cow position: | chr12:18936000-18936214 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 189-386 |
| Cow position: | chr12:41595396-41595601 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 255-442 |
| Cow position: | chr12:19872824-19873004 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.