Cow genome map
| Conread name: | rspl32_c12.y1 |
| Conread position: | 31-354 |
| Cow position: | chr14:36710387-36710054 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 31-442 |
| Cow position: | chr14:28116733-28117154 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 50-277 |
| Cow position: | chr14:46123818-46124032 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 50-442 |
| Cow position: | chr14:32449668-32450053 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 43 |
| Conread position: | 50-442 |
| Cow position: | chr14:40968854-40969251 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 41 |
| Conread position: | 51-287 |
| Cow position: | chr14:25694761-25694991 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 51-298 |
| Cow position: | chr14:42150174-42150418 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 227, 42 |
| Conread position: | 51-350 |
| Cow position: | chr14:50114067-50114371 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 38 |
| Conread position: | 51-412 |
| Cow position: | chr14:28350998-28350631 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 38 |
| Conread position: | 51-414 |
| Cow position: | chr14:16997338-16996969 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-414 |
| Cow position: | chr14:38459452-38459086 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 19 |
| Conread position: | 51-414 |
| Cow position: | chr14:46636835-46636472 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 40 |
| Conread position: | 51-415 |
| Cow position: | chr14:19489681-19490049 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 42 |
| Conread position: | 51-440 |
| Cow position: | chr14:13581570-13581964 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-441 |
| Cow position: | chr14:26449816-26449428 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 42 |
| Conread position: | 51-442 |
| Cow position: | chr14:10310259-10310656 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr14:13619730-13619348 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 171, 42 |
| Conread position: | 51-442 |
| Cow position: | chr14:22027072-22026678 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 42 |
| Conread position: | 51-442 |
| Cow position: | chr14:46960087-46960483 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr14:50069492-50069101 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 62-266 |
| Cow position: | chr14:39773281-39773483 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 121, 31 |
| Conread position: | 72-414 |
| Cow position: | chr14:9482672-9483020 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 19 |
| Conread position: | 85-442 |
| Cow position: | chr14:24980278-24980644 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 101-336 |
| Cow position: | chr14:45789718-45789952 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 174, 191 |
| Conread position: | 101-442 |
| Cow position: | chr14:5500675-5501024 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 97 |
| Conread position: | 106-359 |
| Cow position: | chr14:44888283-44888025 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 180, 207 |
| Conread position: | 115-442 |
| Cow position: | chr14:45847920-45848253 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 22 |
| Conread position: | 123-443 |
| Cow position: | chr14:29340791-29341110 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 162, 43 |
| Conread position: | 125-435 |
| Cow position: | chr14:24797919-24797600 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 152-442 |
| Cow position: | chr14:20786182-20786479 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 122, 243 |
| Conread position: | 152-442 |
| Cow position: | chr14:38046978-38047272 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 140 |
| Conread position: | 158-443 |
| Cow position: | chr14:32580086-32580375 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 141, 43 |
| Conread position: | 171-442 |
| Cow position: | chr14:50142206-50141927 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 186-442 |
| Cow position: | chr14:32500004-32500257 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 188 |
| Conread position: | 187-419 |
| Cow position: | chr14:46752752-46752517 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 101, 189 |
| Conread position: | 194-442 |
| Cow position: | chr14:34354390-34354646 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 86, 187 |
| Conread position: | 201-442 |
| Cow position: | chr14:45066814-45067057 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 88, 38 |
| Conread position: | 207-442 |
| Cow position: | chr14:24895524-24895768 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.