Cow genome map
| Conread name: | rspl32_c12.y1 |
| Conread position: | 14-441 |
| Cow position: | chr17:18241882-18242292 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 13 |
| Conread position: | 14-442 |
| Cow position: | chr17:138493-138915 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 37 |
| Conread position: | 25-442 |
| Cow position: | chr17:13707631-13708018 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 6 |
| Conread position: | 28-443 |
| Cow position: | chr17:1654875-1654449 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 31-441 |
| Cow position: | chr17:20094265-20093848 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 31-442 |
| Cow position: | chr17:4210820-4211242 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 31-442 |
| Cow position: | chr17:20214982-20215396 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 31-442 |
| Cow position: | chr17:27978010-27978416 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 23 |
| Conread position: | 33-442 |
| Cow position: | chr17:6081402-6081803 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 50-267 |
| Cow position: | chr17:13930813-13931024 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 50-441 |
| Cow position: | chr17:145277-144895 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 8 |
| Conread position: | 51-411 |
| Cow position: | chr17:15808903-15809269 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 40 |
| Conread position: | 51-414 |
| Cow position: | chr17:1970067-1970436 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr17:4480966-4480598 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr17:23321504-23321135 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 51-416 |
| Cow position: | chr17:2178780-2179129 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 51-416 |
| Cow position: | chr17:20055053-20055405 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 44 |
| Conread position: | 51-424 |
| Cow position: | chr17:40810667-40811042 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr17:184063-184459 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr17:4084984-4085376 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 42 |
| Conread position: | 51-442 |
| Cow position: | chr17:6262772-6263167 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr17:15438709-15439103 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr17:18100158-18099761 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 42 |
| Conread position: | 51-442 |
| Cow position: | chr17:20084895-20084498 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 51-442 |
| Cow position: | chr17:25739220-25739609 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr17:43991405-43991797 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 52-414 |
| Cow position: | chr17:2245141-2244787 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 223, 48 |
| Conread position: | 52-442 |
| Cow position: | chr17:18591340-18591723 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 41 |
| Conread position: | 52-442 |
| Cow position: | chr17:34236334-34235939 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 39 |
| Conread position: | 53-414 |
| Cow position: | chr17:2176901-2177264 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 16 |
| Conread position: | 55-414 |
| Cow position: | chr17:27791853-27791503 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 6 |
| Conread position: | 55-442 |
| Cow position: | chr17:19234703-19235083 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 38 |
| Conread position: | 60-426 |
| Cow position: | chr17:18777905-18777531 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 31 |
| Conread position: | 73-412 |
| Cow position: | chr17:14213078-14212736 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 18 |
| Conread position: | 90-381 |
| Cow position: | chr17:28024950-28024650 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 115-343 |
| Cow position: | chr17:15364153-15364374 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 180, 51 |
| Conread position: | 123-442 |
| Cow position: | chr17:2583377-2583700 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 251 |
| Conread position: | 123-442 |
| Cow position: | chr17:34000397-34000061 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 21, 130 |
| Conread position: | 125-411 |
| Cow position: | chr17:1672287-1672580 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 56 |
| Conread position: | 147-442 |
| Cow position: | chr17:21666013-21666312 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 177-414 |
| Cow position: | chr17:38991792-38992037 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
Show alignments to all cow chromosomes.