Cow genome map
| Conread name: | rspl32_c12.y1 |
| Conread position: | 31-411 |
| Cow position: | chr2:48360511-48360902 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 32-416 |
| Cow position: | chr2:19213198-19212814 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 66 |
| Conread position: | 32-440 |
| Cow position: | chr2:62819914-62819498 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 32-441 |
| Cow position: | chr2:43878472-43878886 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 50-276 |
| Cow position: | chr2:10657253-10657036 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 50-375 |
| Cow position: | chr2:6965515-6965838 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 43 |
| Conread position: | 50-435 |
| Cow position: | chr2:2181682-2181294 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 41 |
| Conread position: | 51-288 |
| Cow position: | chr2:2772314-2772550 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 220, 42 |
| Conread position: | 51-361 |
| Cow position: | chr2:53030680-53030997 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 42 |
| Conread position: | 51-363 |
| Cow position: | chr2:39424521-39424835 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-380 |
| Cow position: | chr2:43757053-43756727 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-412 |
| Cow position: | chr2:9187289-9186930 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr2:2410252-2409888 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr2:4805150-4804781 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr2:4917480-4917111 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr2:9714259-9714622 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr2:26905836-26906205 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr2:30379866-30380233 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-414 |
| Cow position: | chr2:70669299-70669665 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-423 |
| Cow position: | chr2:34502358-34502724 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 29 |
| Conread position: | 51-424 |
| Cow position: | chr2:50980566-50980197 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-435 |
| Cow position: | chr2:39119191-39119581 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-435 |
| Cow position: | chr2:53542529-53542918 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 26 |
| Conread position: | 51-442 |
| Cow position: | chr2:383530-383135 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 278 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 229, 19 |
| Conread position: | 51-442 |
| Cow position: | chr2:2603252-2603647 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 51-442 |
| Cow position: | chr2:6004246-6003850 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr2:7370258-7370653 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr2:16718314-16717917 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 8 |
| Conread position: | 51-442 |
| Cow position: | chr2:18021318-18020928 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 40 |
| Conread position: | 51-442 |
| Cow position: | chr2:20870304-20869917 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 19 |
| Conread position: | 51-442 |
| Cow position: | chr2:43209729-43210116 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr2:46182946-46182550 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr2:52621365-52621760 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 40 |
| Conread position: | 51-442 |
| Cow position: | chr2:53332392-53332790 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr2:57937985-57938381 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr2:73992313-73992711 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 31 |
| Conread position: | 51-442 |
| Cow position: | chr2:74761469-74761872 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 42 |
| Conread position: | 51-442 |
| Cow position: | chr2:77858919-77859305 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 52-288 |
| Cow position: | chr2:11694933-11695161 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 226, 39 |
| Conread position: | 52-414 |
| Cow position: | chr2:9962480-9962112 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 39 |
| Conread position: | 52-442 |
| Cow position: | chr2:28796435-28796831 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 51 |
| Conread position: | 53-277 |
| Cow position: | chr2:56798731-56798511 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 53-435 |
| Cow position: | chr2:57338546-57338934 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 38 |
| Conread position: | 55-348 |
| Cow position: | chr2:23492388-23492684 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 223, 15 |
| Conread position: | 55-434 |
| Cow position: | chr2:53174919-53175302 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 49 |
| Conread position: | 56-442 |
| Cow position: | chr2:41156766-41157164 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 287 |
| Conread position: | 101-417 |
| Cow position: | chr2:52170037-52170352 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 202 |
| Conread position: | 102-414 |
| Cow position: | chr2:9910916-9911236 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 312 |
| Conread position: | 118-442 |
| Cow position: | chr2:13603015-13603344 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 63 |
| Conread position: | 122-442 |
| Cow position: | chr2:29610476-29610754 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 160, 25 |
| Conread position: | 123-396 |
| Cow position: | chr2:38375827-38376112 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 125-442 |
| Cow position: | chr2:50417672-50417993 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 84 |
| Conread position: | 133-442 |
| Cow position: | chr2:32417953-32417645 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 145, 241 |
| Conread position: | 149-442 |
| Cow position: | chr2:27146424-27146122 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 133, 233 |
| Conread position: | 152-442 |
| Cow position: | chr2:17941365-17941064 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 154-442 |
| Cow position: | chr2:30909189-30909484 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 163-424 |
| Cow position: | chr2:78301697-78301431 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 120, 232 |
| Conread position: | 164-442 |
| Cow position: | chr2:67418068-67417785 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 115, 279 |
| Conread position: | 172-442 |
| Cow position: | chr2:50406819-50407088 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 178-414 |
| Cow position: | chr2:9956517-9956272 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 201-442 |
| Cow position: | chr2:46940248-46940011 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 202-442 |
| Cow position: | chr2:41046126-41045882 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 240 |
| Conread position: | 206-442 |
| Cow position: | chr2:943769-943995 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 95, 183 |
Show alignments to all cow chromosomes.