Cow genome map
| Conread name: | rspl32_c12.y1 |
| Conread position: | 31-280 |
| Cow position: | chr24:7404954-7404705 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 21, 78 |
| Conread position: | 31-410 |
| Cow position: | chr24:17105769-17105384 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 32-442 |
| Cow position: | chr24:38002932-38002514 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 33-442 |
| Cow position: | chr24:6524103-6524524 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 50-429 |
| Cow position: | chr24:12090109-12090495 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 43 |
| Conread position: | 50-435 |
| Cow position: | chr24:20367497-20367884 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 41 |
| Conread position: | 50-441 |
| Cow position: | chr24:6052214-6052600 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 43 |
| Conread position: | 51-267 |
| Cow position: | chr24:17545356-17545564 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 51-335 |
| Cow position: | chr24:6146430-6146704 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 226, 19 |
| Conread position: | 51-359 |
| Cow position: | chr24:26388754-26388448 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 224, 35 |
| Conread position: | 51-381 |
| Cow position: | chr24:14865903-14865583 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 51-414 |
| Cow position: | chr24:13191298-13191660 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-424 |
| Cow position: | chr24:32361714-32361346 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 42 |
| Conread position: | 51-432 |
| Cow position: | chr24:12240008-12240398 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 214, 42 |
| Conread position: | 51-436 |
| Cow position: | chr24:17764468-17764082 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 42 |
| Conread position: | 51-440 |
| Cow position: | chr24:41062586-41062980 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 43 |
| Conread position: | 51-442 |
| Cow position: | chr24:6036050-6035653 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 42 |
| Conread position: | 51-442 |
| Cow position: | chr24:9549396-9549790 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 51-442 |
| Cow position: | chr24:12348263-12347866 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 51-442 |
| Cow position: | chr24:14194717-14194322 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr24:14760024-14760421 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 42 |
| Conread position: | 51-442 |
| Cow position: | chr24:25698076-25698465 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr24:31067914-31067518 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 42 |
| Conread position: | 51-442 |
| Cow position: | chr24:33937060-33937456 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 52-314 |
| Cow position: | chr24:14173632-14173374 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 224, 41 |
| Conread position: | 52-442 |
| Cow position: | chr24:8607461-8607857 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 41 |
| Conread position: | 53-442 |
| Cow position: | chr24:22974940-22975335 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 54-442 |
| Cow position: | chr24:43634252-43634639 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 55-442 |
| Cow position: | chr24:32849275-32849666 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 231, 46 |
| Conread position: | 58-414 |
| Cow position: | chr24:13491634-13491990 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 217, 30 |
| Conread position: | 76-442 |
| Cow position: | chr24:38641531-38641898 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 210, 48 |
| Conread position: | 101-414 |
| Cow position: | chr24:20603927-20604249 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 101-442 |
| Cow position: | chr24:22047889-22047542 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 74 |
| Conread position: | 116-442 |
| Cow position: | chr24:26847410-26847078 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 183, 74 |
| Conread position: | 148-414 |
| Cow position: | chr24:5279437-5279712 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 149-442 |
| Cow position: | chr24:14250357-14250057 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 296 |
| Conread position: | 153-435 |
| Cow position: | chr24:11462781-11462486 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 289 |
| Conread position: | 162-442 |
| Cow position: | chr24:32853451-32853740 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 166-442 |
| Cow position: | chr24:16474549-16474831 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 114 |
| Conread position: | 186-443 |
| Cow position: | chr24:28336794-28336533 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 116 |
| Conread position: | 188-411 |
| Cow position: | chr24:36404587-36404815 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 97, 83 |
| Conread position: | 218-442 |
| Cow position: | chr24:30870674-30870441 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.