Cow genome map
| Conread name: | rspl32_c12.y1 |
| Conread position: | 25-442 |
| Cow position: | chr4:39645493-39645927 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 31-436 |
| Cow position: | chr4:22316479-22316890 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 31-442 |
| Cow position: | chr4:14918807-14919208 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 50-411 |
| Cow position: | chr4:59783449-59783817 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 51-267 |
| Cow position: | chr4:51761218-51761005 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 51-267 |
| Cow position: | chr4:67681202-67680989 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 51-410 |
| Cow position: | chr4:12454750-12455103 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 227, 19 |
| Conread position: | 51-411 |
| Cow position: | chr4:17234796-17235162 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr4:606386-606749 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr4:3170056-3170424 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 51-414 |
| Cow position: | chr4:24139647-24140017 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 51-414 |
| Cow position: | chr4:27336988-27337359 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 51-426 |
| Cow position: | chr4:38583656-38584037 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-428 |
| Cow position: | chr4:23525362-23525737 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 19 |
| Conread position: | 51-432 |
| Cow position: | chr4:4673804-4673417 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 51-442 |
| Cow position: | chr4:20242931-20243328 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr4:20657285-20656893 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr4:23150882-23150487 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr4:27288326-27287935 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 19 |
| Conread position: | 51-442 |
| Cow position: | chr4:34712592-34712988 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr4:36899152-36899549 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr4:41961672-41962067 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr4:42330946-42330560 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 242, 42 |
| Conread position: | 51-442 |
| Cow position: | chr4:43316874-43316477 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 39 |
| Conread position: | 51-442 |
| Cow position: | chr4:43883869-43884265 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 7 |
| Conread position: | 51-442 |
| Cow position: | chr4:57987519-57987915 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 42 |
| Conread position: | 51-442 |
| Cow position: | chr4:60625752-60625366 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 249, 28 |
| Conread position: | 51-442 |
| Cow position: | chr4:65918465-65918851 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 7 |
| Conread position: | 51-443 |
| Cow position: | chr4:1239643-1239258 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 42 |
| Conread position: | 51-443 |
| Cow position: | chr4:29530682-29530284 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-443 |
| Cow position: | chr4:67394002-67394400 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 52-426 |
| Cow position: | chr4:30507980-30508354 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 41 |
| Conread position: | 52-442 |
| Cow position: | chr4:58882608-58882209 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 271 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 222, 41 |
| Conread position: | 60-442 |
| Cow position: | chr4:10823084-10822701 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 63-337 |
| Cow position: | chr4:63639334-63639059 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 208, 30 |
| Conread position: | 101-442 |
| Cow position: | chr4:47115657-47116007 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 346 |
| Conread position: | 105-442 |
| Cow position: | chr4:38180586-38180926 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 99 |
| Conread position: | 109-436 |
| Cow position: | chr4:33262-32934 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 126 |
| Conread position: | 116-441 |
| Cow position: | chr4:20090948-20091271 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 103 |
| Conread position: | 116-442 |
| Cow position: | chr4:58859765-58859433 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 142-442 |
| Cow position: | chr4:19140866-19141174 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 136, 64 |
| Conread position: | 151-442 |
| Cow position: | chr4:61449385-61449685 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 161-414 |
| Cow position: | chr4:10553130-10553386 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 168-420 |
| Cow position: | chr4:25578491-25578751 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 132, 31 |
| Conread position: | 186-442 |
| Cow position: | chr4:61724147-61724410 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 189-442 |
| Cow position: | chr4:62569607-62569856 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 177 |
| Conread position: | 194-442 |
| Cow position: | chr4:46667577-46667830 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 203-426 |
| Cow position: | chr4:61191912-61192137 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 72, 89 |
| Conread position: | 206-414 |
| Cow position: | chr4:5441734-5441517 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 224-435 |
| Cow position: | chr4:1006838-1007057 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 113 |
| Conread position: | 224-442 |
| Cow position: | chr4:32249437-32249666 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 238-442 |
| Cow position: | chr4:68108153-68107949 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 137 |
Show alignments to all cow chromosomes.