Cow genome map
| Conread name: | rspl32_c12.y1 |
| Conread position: | 13-442 |
| Cow position: | chr8:53428648-53429077 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 27-442 |
| Cow position: | chr8:12661913-12661493 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 31-299 |
| Cow position: | chr8:59657799-59658064 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 47-443 |
| Cow position: | chr8:47676113-47676518 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 45 |
| Conread position: | 50-442 |
| Cow position: | chr8:5020295-5020693 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 43 |
| Conread position: | 51-267 |
| Cow position: | chr8:6852455-6852668 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 51-267 |
| Cow position: | chr8:45337874-45337661 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 51-411 |
| Cow position: | chr8:32628721-32628360 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr8:15224094-15224457 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 37 |
| Conread position: | 51-414 |
| Cow position: | chr8:16194409-16194777 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-414 |
| Cow position: | chr8:25342487-25342850 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 42 |
| Conread position: | 51-432 |
| Cow position: | chr8:8468568-8468951 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 19 |
| Conread position: | 51-435 |
| Cow position: | chr8:31977117-31976727 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 40 |
| Conread position: | 51-440 |
| Cow position: | chr8:1998473-1998862 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr8:7167247-7167644 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr8:8914015-8914412 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 38 |
| Conread position: | 51-442 |
| Cow position: | chr8:12446106-12445713 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 40 |
| Conread position: | 51-442 |
| Cow position: | chr8:14588582-14588186 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr8:16940680-16940290 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 41 |
| Conread position: | 51-442 |
| Cow position: | chr8:22030404-22030801 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr8:22376899-22376502 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 40 |
| Conread position: | 51-442 |
| Cow position: | chr8:30157972-30158370 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 40 |
| Conread position: | 51-442 |
| Cow position: | chr8:32042079-32042475 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr8:37534299-37534705 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 51-442 |
| Cow position: | chr8:38562155-38561758 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 49 |
| Conread position: | 51-442 |
| Cow position: | chr8:39740400-39740003 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 51-442 |
| Cow position: | chr8:41950472-41950857 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 27 |
| Conread position: | 51-442 |
| Cow position: | chr8:49220476-49220867 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 51-442 |
| Cow position: | chr8:50927814-50927418 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 42 |
| Conread position: | 51-442 |
| Cow position: | chr8:60067169-60067564 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 45 |
| Conread position: | 52-442 |
| Cow position: | chr8:8009676-8010079 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 37 |
| Conread position: | 52-442 |
| Cow position: | chr8:29918679-29918316 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 226, 39 |
| Conread position: | 54-442 |
| Cow position: | chr8:5244144-5243757 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 35 |
| Conread position: | 56-311 |
| Cow position: | chr8:39968982-39968731 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 90, 44 |
| Conread position: | 61-440 |
| Cow position: | chr8:51061843-51061457 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 32 |
| Conread position: | 102-267 |
| Cow position: | chr8:7052216-7052381 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 116-420 |
| Cow position: | chr8:19194033-19194333 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 75 |
| Conread position: | 127-344 |
| Cow position: | chr8:55089428-55089634 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 211, 73 |
| Conread position: | 135-410 |
| Cow position: | chr8:16384597-16384322 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 136, 199 |
| Conread position: | 148-300 |
| Cow position: | chr8:7682870-7682719 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 103 |
| Conread position: | 153-344 |
| Cow position: | chr8:32989040-32988849 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 138, 70 |
| Conread position: | 155-411 |
| Cow position: | chr8:11300815-11301073 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 157-411 |
| Cow position: | chr8:53821466-53821729 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 161-442 |
| Cow position: | chr8:42116759-42117037 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 134 |
| Conread position: | 223-442 |
| Cow position: | chr8:9963596-9963372 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 243-440 |
| Cow position: | chr8:59507422-59507610 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 255-442 |
| Cow position: | chr8:39987417-39987224 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 157 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.