Cow genome map

Conread name: rspl32_c12.y1

Conread position: 25-424
Cow position: chr9:3222389-3222790 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 77

Conread position: 30-442
Cow position: chr9:5517105-5517518 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 65

Conread position: 31-442
Cow position: chr9:30401203-30401622 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 65

Conread position: 31-442
Cow position: chr9:59196775-59197190 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 33-311
Cow position: chr9:17008042-17007756 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 66

Conread position: 42-442
Cow position: chr9:19078802-19079204 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 53

Conread position: 50-276
Cow position: chr9:31077902-31078121 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 51-267
Cow position: chr9:1249054-1248841 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 51-345
Cow position: chr9:43225758-43225462 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-384
Cow position: chr9:10939667-10939996 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-414
Cow position: chr9:777871-777499 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 51-414
Cow position: chr9:28681143-28681512 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr9:39303610-39303241 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-414
Cow position: chr9:47044890-47045259 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-416
Cow position: chr9:62444032-62443669 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 42

Conread position: 51-435
Cow position: chr9:44203137-44202747 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 40

Conread position: 51-435
Cow position: chr9:47170995-47171386 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 40

Conread position: 51-442
Cow position: chr9:2495798-2495401 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 45

Conread position: 51-442
Cow position: chr9:7005684-7006080 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr9:28785285-28785681 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 42

Conread position: 51-442
Cow position: chr9:31810520-31810917 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 51-442
Cow position: chr9:44168532-44168930 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 40

Conread position: 51-442
Cow position: chr9:53776644-53777032 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 29

Conread position: 51-442
Cow position: chr9:54413664-54413270 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 8

Conread position: 52-289
Cow position: chr9:7844841-7844619 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 52-379
Cow position: chr9:14002981-14003306 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 52-442
Cow position: chr9:10856964-10857372 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 41

Conread position: 52-442
Cow position: chr9:42868925-42868532 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 53-442
Cow position: chr9:6365322-6365716 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 40

Conread position: 55-440
Cow position: chr9:10678978-10678592 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 37

Conread position: 55-442
Cow position: chr9:2856791-2857183 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 38

Conread position: 56-442
Cow position: chr9:5006921-5007305 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 46

Conread position: 58-407
Cow position: chr9:56862207-56861865 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 35

Conread position: 72-442
Cow position: chr9:34946050-34945674 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 21

Conread position: 95-442
Cow position: chr9:23421570-23421923 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 183, 293

Conread position: 101-442
Cow position: chr9:50326687-50327035 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 112

Conread position: 117-442
Cow position: chr9:30439404-30439734 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 79

Conread position: 118-440
Cow position: chr9:3411886-3411557 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 34

Conread position: 125-442
Cow position: chr9:18710507-18710831 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 203

Conread position: 135-441
Cow position: chr9:3933088-3932775 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 60

Conread position: 148-311
Cow position: chr9:30020473-30020636 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 127, 91

Conread position: 158-364
Cow position: chr9:25596699-25596913 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 117, 184

Conread position: 161-442
Cow position: chr9:2618747-2618445 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 165-442
Cow position: chr9:1259486-1259776 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 187-360
Cow position: chr9:24725676-24725852 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 132, 104

Conread position: 205-442
Cow position: chr9:26576795-26577033 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 109, 88

Conread position: 209-442
Cow position: chr9:46670029-46670267 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 147

Show alignments to all cow chromosomes.