Cow genome map

Conread name: rsug05_n17.y1

Conread position: 1-174
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 1-174
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 133

Conread position: 1-174
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 82

Conread position: 1-195
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 107

Conread position: 1-202
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 126

Conread position: 1-202
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 126

Conread position: 1-207
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 179, 56

Conread position: 1-208
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 1-210
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 123

Conread position: 1-210
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 94

Conread position: 1-212
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 145

Conread position: 1-215
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 99

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 174

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 111

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 213

Conread position: 1-238
Cow position:
Alignm length: 240
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 176

Conread position: 1-247
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 111

Conread position: 1-249
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 212

Conread position: 2-208
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 30

Conread position: 2-248
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 164, 0

Conread position: 3-202
Cow position:
Alignm length: 203
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 177, 29

Conread position: 7-174
Cow position:
Alignm length: 168
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 8-166
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 94, 90

Conread position: 8-174
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-206
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 8-210
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 151

Conread position: 8-213
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 168

Conread position: 8-213
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 8-213
Cow position:
Alignm length: 207
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 186, 167

Conread position: 8-220
Cow position:
Alignm length: 222
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 173, 0

Conread position: 8-222
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 8-231
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 168, 123

Conread position: 8-249
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 10-166
Cow position:
Alignm length: 157
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-172
Cow position:
Alignm length: 164
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 13-159
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-174
Cow position:
Alignm length: 162
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-208
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 13-213
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 167, 0

Conread position: 13-225
Cow position:
Alignm length: 213
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-243
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 112, 216

Conread position: 14-174
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 14-213
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 188, 108

Conread position: 14-220
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 162, 111

Conread position: 14-222
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 40

Conread position: 14-228
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 111, 163

Conread position: 21-160
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 21-173
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 21-174
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 21-197
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 145, 97

Conread position: 21-210
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 145, 104

Conread position: 21-213
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 146, 110

Conread position: 21-214
Cow position:
Alignm length: 202
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 158, 0

Conread position: 21-222
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 159, 181

Conread position: 22-208
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 70

Conread position: 23-210
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 23-212
Cow position:
Alignm length: 192
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 87

Conread position: 23-227
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 24-213
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 34-221
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 134

Conread position: 36-207
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 37-174
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 37-178
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 37-201
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 37-208
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 140, 0

Conread position: 37-210
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 138, 0

Conread position: 37-212
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 144, 0

Conread position: 37-217
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 141, 0

Conread position: 37-221
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 181, 139

Conread position: 37-222
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 37-224
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 141, 0

Conread position: 37-234
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 142

Conread position: 38-159
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 38-166
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 38-166
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 38-174
Cow position:
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 38-174
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 38-208
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 84

Conread position: 38-209
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 69

Conread position: 38-210
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 38-213
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 87

Conread position: 38-215
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 38-215
Cow position:
Alignm length: 178
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 137, 0

Conread position: 38-215
Cow position:
Alignm length: 178
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 38-228
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 135, 0

Conread position: 39-197
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 39-205
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 0

Conread position: 39-208
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 39-209
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 39-215
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 39-215
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 0

Conread position: 39-224
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 156, 0

Conread position: 39-225
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 140, 179

Conread position: 39-242
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 141, 92

Conread position: 39-243
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 39-256
Cow position:
Alignm length: 219
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 161

Conread position: 43-199
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 6

Conread position: 43-207
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 25

Conread position: 44-158
Cow position:
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 44-158
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 44-160
Cow position:
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 44-173
Cow position:
Alignm length: 130
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 44-174
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 44-178
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 44-178
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 44-204
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 136, 43

Conread position: 44-208
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 123, 49

Conread position: 44-209
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 136, 0

Conread position: 44-210
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 44-213
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 58

Conread position: 44-215
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 161, 73

Conread position: 44-219
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 154, 0

Conread position: 44-220
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 44-222
Cow position:
Alignm length: 179
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 44-224
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 67, 133

Conread position: 44-241
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 45-158
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 45-166
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 45-174
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 45-175
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 45-209
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 45-223
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 46-216
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 46-222
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 158, 76

Conread position: 46-228
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 159, 129

Conread position: 47-221
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 48-214
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 48-222
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 159

Conread position: 48-222
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 157

Conread position: 51-207
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 51-210
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 51-213
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 79

Conread position: 53-256
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 65

Conread position: 54-174
Cow position:
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 56-211
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 61-173
Cow position:
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 204-475
Cow position:
Alignm length: 279
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 145, 40

Conread position: 218-475
Cow position:
Alignm length: 265
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 120, 26

Show alignments to all cow chromosomes.