Cow genome map
| Conread name: | rsug05_n17.y1 |
| Conread position: | 1-173 |
| Cow position: | chr14:24922144-24921973 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-213 |
| Cow position: | chr14:4848393-4848174 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-222 |
| Cow position: | chr14:11285622-11285404 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 179, 30 |
| Conread position: | 1-228 |
| Cow position: | chr14:26655088-26655312 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 1-244 |
| Cow position: | chr14:10609726-10609476 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 30, 210 |
| Conread position: | 3-251 |
| Cow position: | chr14:20826534-20826292 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 6-174 |
| Cow position: | chr14:22989074-22988909 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 6-220 |
| Cow position: | chr14:1708617-1708828 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 8-174 |
| Cow position: | chr14:42419236-42419408 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 8-236 |
| Cow position: | chr14:25986553-25986329 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 168 |
| Conread position: | 8-241 |
| Cow position: | chr14:15469945-15470187 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 132, 39 |
| Conread position: | 13-199 |
| Cow position: | chr14:50362826-50362633 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 153, 148 |
| Conread position: | 13-208 |
| Cow position: | chr14:7198530-7198327 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 13-222 |
| Cow position: | chr14:27303692-27303475 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 169 |
| Conread position: | 13-224 |
| Cow position: | chr14:27823464-27823252 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 20-213 |
| Cow position: | chr14:20110697-20110895 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 160, 105 |
| Conread position: | 21-168 |
| Cow position: | chr14:41191071-41191218 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-174 |
| Cow position: | chr14:28924192-28924039 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-222 |
| Cow position: | chr14:18270385-18270184 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 158, 104 |
| Conread position: | 22-223 |
| Cow position: | chr14:13846008-13845809 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 158, 76 |
| Conread position: | 37-166 |
| Cow position: | chr14:40952279-40952148 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 37-174 |
| Cow position: | chr14:28378367-28378231 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 37-174 |
| Cow position: | chr14:40754239-40754370 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 37-178 |
| Cow position: | chr14:18412583-18412724 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-213 |
| Cow position: | chr14:7036349-7036522 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 37-213 |
| Cow position: | chr14:15428486-15428306 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 128, 167 |
| Conread position: | 37-213 |
| Cow position: | chr14:44713427-44713254 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 37-221 |
| Cow position: | chr14:8083206-8083021 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 159, 73 |
| Conread position: | 38-174 |
| Cow position: | chr14:30023190-30023326 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-207 |
| Cow position: | chr14:32784108-32784285 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 38-213 |
| Cow position: | chr14:19618744-19618917 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 163, 60 |
| Conread position: | 39-174 |
| Cow position: | chr14:21592997-21593128 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 39-210 |
| Cow position: | chr14:19832387-19832563 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 95 |
| Conread position: | 39-213 |
| Cow position: | chr14:26116068-26115886 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 141, 169 |
| Conread position: | 39-215 |
| Cow position: | chr14:10937679-10937503 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-226 |
| Cow position: | chr14:26800305-26800121 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 39-227 |
| Cow position: | chr14:12072950-12073133 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 181, 71 |
| Conread position: | 39-228 |
| Cow position: | chr14:11296450-11296256 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 39-229 |
| Cow position: | chr14:35421076-35421265 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 40-221 |
| Cow position: | chr14:28304778-28304957 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 44-166 |
| Cow position: | chr14:29282756-29282634 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-166 |
| Cow position: | chr14:31342213-31342091 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-174 |
| Cow position: | chr14:37504516-37504386 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-207 |
| Cow position: | chr14:5668117-5668289 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 44-207 |
| Cow position: | chr14:29965020-29964858 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 44-210 |
| Cow position: | chr14:27364581-27364407 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 44-213 |
| Cow position: | chr14:13385369-13385204 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 44-221 |
| Cow position: | chr14:16344145-16344328 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 45-222 |
| Cow position: | chr14:40230635-40230809 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 46-179 |
| Cow position: | chr14:10939862-10939995 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 46-222 |
| Cow position: | chr14:10440927-10440749 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 133 |
| Conread position: | 46-222 |
| Cow position: | chr14:36559227-36559398 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 159, 74 |
| Conread position: | 46-229 |
| Cow position: | chr14:33457044-33457232 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 121, 64 |
| Conread position: | 47-212 |
| Cow position: | chr14:21530075-21530244 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 51-174 |
| Cow position: | chr14:13515995-13516118 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-210 |
| Cow position: | chr14:35381585-35381424 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 129, 32 |
| Conread position: | 51-213 |
| Cow position: | chr14:31893574-31893417 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 52-214 |
| Cow position: | chr14:19321514-19321683 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 114, 159 |
| Conread position: | 53-238 |
| Cow position: | chr14:12138009-12137824 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.