Cow genome map
Conread name: | rsug05_n17.y1 |
Conread position: | 1-167 |
Cow position: | chr16:23811121-23811285 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-174 |
Cow position: | chr16:7442101-7441931 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 125 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 1-174 |
Cow position: | chr16:12220678-12220855 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 136 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1-197 |
Cow position: | chr16:30305815-30305622 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 138 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 99, 31 |
Conread position: | 1-206 |
Cow position: | chr16:23955835-23955622 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 148 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 30, 99 |
Conread position: | 1-208 |
Cow position: | chr16:21370190-21369977 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 146 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 96, 31 |
Conread position: | 1-210 |
Cow position: | chr16:44138495-44138285 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 146 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1-213 |
Cow position: | chr16:7928388-7928165 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 159 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-213 |
Cow position: | chr16:19053886-19053670 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 155 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 20, 126 |
Conread position: | 1-213 |
Cow position: | chr16:33198440-33198217 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 156 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 1-215 |
Cow position: | chr16:2750978-2751180 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 148 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 1-222 |
Cow position: | chr16:8738062-8738286 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 152 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 15, 122 |
Conread position: | 1-237 |
Cow position: | chr16:30662272-30662033 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 161 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 34, 163 |
Conread position: | 2-210 |
Cow position: | chr16:8065890-8065683 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 144 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 28, 175 |
Conread position: | 2-210 |
Cow position: | chr16:15714107-15714317 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 143 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 2-218 |
Cow position: | chr16:8522387-8522170 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 150 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 160, 29 |
Conread position: | 2-221 |
Cow position: | chr16:38243663-38243438 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 150 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 178, 0 |
Conread position: | 7-173 |
Cow position: | chr16:31575149-31575315 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 117 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-174 |
Cow position: | chr16:38663705-38663539 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 119 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 7-222 |
Cow position: | chr16:2223394-2223179 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 151 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 24, 170 |
Conread position: | 8-174 |
Cow position: | chr16:7812696-7812862 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 118 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-174 |
Cow position: | chr16:9730200-9730035 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 8-174 |
Cow position: | chr16:32142096-32142261 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 121 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 8-210 |
Cow position: | chr16:56615497-56615289 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 147 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 158, 78 |
Conread position: | 8-214 |
Cow position: | chr16:10249813-10249607 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 139 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-217 |
Cow position: | chr16:46548263-46548042 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 155 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 8-220 |
Cow position: | chr16:11003559-11003350 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 141 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 167, 0 |
Conread position: | 13-210 |
Cow position: | chr16:45122046-45122244 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 138 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 124, 166 |
Conread position: | 13-222 |
Cow position: | chr16:22323799-22323596 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 143 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 13-222 |
Cow position: | chr16:43308550-43308343 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 149 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 167, 74 |
Conread position: | 13-231 |
Cow position: | chr16:50442559-50442778 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 147 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 21-166 |
Cow position: | chr16:50289171-50289312 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 21-174 |
Cow position: | chr16:15023612-15023460 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 141, 0 |
Conread position: | 21-174 |
Cow position: | chr16:33290403-33290556 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 21-206 |
Cow position: | chr16:44144407-44144600 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 137 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 159, 0 |
Conread position: | 21-210 |
Cow position: | chr16:18048136-18047950 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 131 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 147, 0 |
Conread position: | 21-222 |
Cow position: | chr16:9596389-9596587 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 159, 103 |
Conread position: | 21-222 |
Cow position: | chr16:45193790-45193581 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 146 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 159, 106 |
Conread position: | 21-236 |
Cow position: | chr16:53451724-53451931 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 147 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 22-210 |
Cow position: | chr16:21044316-21044512 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 139 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 23-197 |
Cow position: | chr16:43758625-43758446 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 130 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 23-210 |
Cow position: | chr16:13996175-13995983 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 137 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 157, 0 |
Conread position: | 23-221 |
Cow position: | chr16:8493970-8493776 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 134 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 23-222 |
Cow position: | chr16:38581023-38581219 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 136 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 157, 0 |
Conread position: | 29-222 |
Cow position: | chr16:21002348-21002142 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 33-203 |
Cow position: | chr16:46184188-46184356 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 36-215 |
Cow position: | chr16:56595356-56595171 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 144, 171 |
Conread position: | 37-173 |
Cow position: | chr16:7665672-7665808 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 37-174 |
Cow position: | chr16:9097058-9097195 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 37-174 |
Cow position: | chr16:15949473-15949339 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 37-204 |
Cow position: | chr16:5243121-5243288 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 120 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 101, 143 |
Conread position: | 37-204 |
Cow position: | chr16:14343614-14343782 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 122 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 37-213 |
Cow position: | chr16:8810059-8809887 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 131 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 143, 85 |
Conread position: | 37-243 |
Cow position: | chr16:25419219-25419018 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 142 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 195, 138 |
Conread position: | 38-166 |
Cow position: | chr16:4192398-4192270 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 97 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-173 |
Cow position: | chr16:27327089-27326954 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 103 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-174 |
Cow position: | chr16:28233269-28233133 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 101 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-215 |
Cow position: | chr16:56912651-56912476 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 128 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 103, 9 |
Conread position: | 39-174 |
Cow position: | chr16:19282042-19282176 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 39-210 |
Cow position: | chr16:4857065-4856897 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 122 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 147, 0 |
Conread position: | 39-213 |
Cow position: | chr16:10011816-10011632 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 132 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 39-213 |
Cow position: | chr16:20614535-20614701 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 127 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 39-224 |
Cow position: | chr16:55784715-55784529 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 139 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 87, 73 |
Conread position: | 39-240 |
Cow position: | chr16:42107666-42107862 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 140 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 136, 0 |
Conread position: | 44-166 |
Cow position: | chr16:4277512-4277391 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 44-173 |
Cow position: | chr16:28444448-28444319 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 99 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 44-174 |
Cow position: | chr16:3049112-3048983 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 44-174 |
Cow position: | chr16:15407517-15407387 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 99 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 44-174 |
Cow position: | chr16:31241252-31241123 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 44-208 |
Cow position: | chr16:56082323-56082151 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 44-210 |
Cow position: | chr16:10032904-10033078 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 125 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 44-210 |
Cow position: | chr16:20205503-20205672 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 136, 0 |
Conread position: | 44-215 |
Cow position: | chr16:29311565-29311747 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 44-244 |
Cow position: | chr16:9958871-9959071 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 65, 82 |
Conread position: | 45-173 |
Cow position: | chr16:47662771-47662899 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 96 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 45-210 |
Cow position: | chr16:11775951-11775795 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 46-207 |
Cow position: | chr16:24672819-24672650 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 128 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 46, 53 |
Conread position: | 46-210 |
Cow position: | chr16:21442567-21442396 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 72, 37 |
Conread position: | 46-221 |
Cow position: | chr16:47274683-47274511 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 122 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 46-222 |
Cow position: | chr16:17617319-17617148 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 46-248 |
Cow position: | chr16:40446305-40446509 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 145 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 52, 133 |
Conread position: | 48-174 |
Cow position: | chr16:51393345-51393218 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 77, 53 |
Conread position: | 48-242 |
Cow position: | chr16:27117350-27117551 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 141 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 118, 175 |
Conread position: | 52-241 |
Cow position: | chr16:16232106-16232295 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 130 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.