Cow genome map

Conread name: rsug05_n17.y1

Conread position: 1-173
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 91

Conread position: 1-174
Cow position:
Alignm length: 176
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1-174
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 97

Conread position: 1-174
Cow position:
Alignm length: 175
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 23

Conread position: 1-178
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 31

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 99

Conread position: 1-213
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 124

Conread position: 1-213
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 203, 180

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 195

Conread position: 1-220
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 197, 31

Conread position: 1-221
Cow position:
Alignm length: 223
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 1-222
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 31

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 95

Conread position: 2-174
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 106

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 202, 120

Conread position: 2-222
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 66

Conread position: 6-197
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 6-218
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 83

Conread position: 8-178
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 8-178
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 8-208
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 8-209
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 158, 13

Conread position: 8-209
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 163, 98

Conread position: 8-210
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 8-212
Cow position:
Alignm length: 207
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 162

Conread position: 8-225
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 162, 110

Conread position: 9-208
Cow position:
Alignm length: 202
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 113, 12

Conread position: 12-220
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 84

Conread position: 13-158
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 13-174
Cow position:
Alignm length: 162
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-174
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 13-197
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 111

Conread position: 13-206
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 153, 85

Conread position: 13-225
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 123, 164

Conread position: 14-222
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 15-213
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 190, 95

Conread position: 20-256
Cow position:
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 98

Conread position: 21-166
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 21-193
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 160, 0

Conread position: 21-206
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 0

Conread position: 21-209
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 159, 50

Conread position: 21-212
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 21-215
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 145, 0

Conread position: 21-222
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 145, 98

Conread position: 21-224
Cow position:
Alignm length: 204
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 147, 0

Conread position: 21-225
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 22-214
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 77, 85

Conread position: 37-166
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 37-204
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 129, 68

Conread position: 37-213
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 85

Conread position: 37-220
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 126

Conread position: 37-220
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 37-222
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 142

Conread position: 37-222
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 168, 36

Conread position: 37-222
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 138, 0

Conread position: 37-225
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 115

Conread position: 37-225
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 41

Conread position: 38-156
Cow position:
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 38-174
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 38-174
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 101

Conread position: 38-174
Cow position:
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 38-178
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 38-208
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 38-210
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 140

Conread position: 38-210
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 38-211
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 38-211
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 128, 87

Conread position: 38-213
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 38-222
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 128, 136

Conread position: 39-171
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 39-175
Cow position:
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 39-181
Cow position:
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 39-200
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 137, 0

Conread position: 39-201
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 39-213
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 86

Conread position: 39-214
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 67

Conread position: 39-220
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 87

Conread position: 39-222
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 141, 0

Conread position: 39-229
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 0

Conread position: 44-174
Cow position:
Alignm length: 131
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 44-184
Cow position:
Alignm length: 141
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 44-196
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 131, 81

Conread position: 44-201
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 123, 8

Conread position: 44-206
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 74

Conread position: 44-207
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 44-210
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 81

Conread position: 44-210
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 44-213
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 131, 78

Conread position: 44-213
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 44-213
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 52

Conread position: 44-224
Cow position:
Alignm length: 181
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 133, 0

Conread position: 44-225
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 126, 66

Conread position: 45-148
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 45-198
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 45-209
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 81

Conread position: 46-174
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 46-178
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 46-193
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 98

Conread position: 46-202
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 130, 0

Conread position: 46-203
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 46-209
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 61

Conread position: 46-209
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 148, 126

Conread position: 46-213
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 120, 64

Conread position: 46-214
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 0

Conread position: 46-220
Cow position:
Alignm length: 175
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 46-222
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 47-197
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 133, 78

Conread position: 47-205
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 133, 0

Conread position: 51-213
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 52-222
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 54-214
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 126, 61

Conread position: 204-472
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 145, 29

Show alignments to all cow chromosomes.