Cow genome map

Conread name: rsug05_n17.y1

Conread position: 1-158
Cow position: chr20:11008209-11008368 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 1-174
Cow position: chr20:14433383-14433209 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 112

Conread position: 1-174
Cow position: chr20:39417860-39417691 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-205
Cow position: chr20:5814606-5814815 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 31

Conread position: 1-213
Cow position: chr20:14282959-14283170 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 176

Conread position: 2-215
Cow position: chr20:15529901-15530119 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 52

Conread position: 2-222
Cow position: chr20:11359591-11359373 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 108

Conread position: 3-209
Cow position: chr20:25953305-25953521 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 106

Conread position: 7-166
Cow position: chr20:23590702-23590543 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-166
Cow position: chr20:24711887-24712047 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 7-218
Cow position: chr20:34083762-34083984 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 123

Conread position: 8-160
Cow position: chr20:22959299-22959148 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 8-174
Cow position: chr20:10200394-10200560 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 8-220
Cow position: chr20:5950595-5950374 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 91, 99

Conread position: 8-225
Cow position: chr20:28249228-28249455 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 168, 0

Conread position: 13-210
Cow position: chr20:29990394-29990194 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 167, 41

Conread position: 14-208
Cow position: chr20:12581900-12581709 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 88

Conread position: 20-174
Cow position: chr20:3141634-3141787 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 21-173
Cow position: chr20:6054448-6054297 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 21-173
Cow position: chr20:16291749-16291901 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 19

Conread position: 21-213
Cow position: chr20:17251778-17251966 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 37-168
Cow position: chr20:30639706-30639572 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 37-191
Cow position: chr20:5703548-5703703 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 37-201
Cow position: chr20:25474630-25474797 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 59

Conread position: 38-170
Cow position: chr20:39269007-39268876 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 38-174
Cow position: chr20:354823-354687 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 38-178
Cow position: chr20:1824550-1824416 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 38-178
Cow position: chr20:17544702-17544842 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 38-213
Cow position: chr20:5365004-5365175 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 137, 0

Conread position: 38-215
Cow position: chr20:37357934-37358112 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 164

Conread position: 38-222
Cow position: chr20:27315056-27315233 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 167, 72

Conread position: 39-158
Cow position: chr20:20202298-20202415 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 39-210
Cow position: chr20:14755761-14755588 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 86

Conread position: 39-216
Cow position: chr20:11002480-11002667 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 141, 0

Conread position: 44-201
Cow position: chr20:8442371-8442208 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 106, 74

Conread position: 44-211
Cow position: chr20:2798907-2798739 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 136, 65

Conread position: 44-214
Cow position: chr20:39016788-39016621 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 131, 0

Conread position: 44-222
Cow position: chr20:297924-297748 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 143

Conread position: 44-222
Cow position: chr20:34097869-34097689 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 45-213
Cow position: chr20:14490331-14490500 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 75

Conread position: 46-208
Cow position: chr20:19201617-19201786 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 134, 161

Conread position: 46-214
Cow position: chr20:34271413-34271578 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 46-221
Cow position: chr20:21344553-21344725 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 133, 0

Conread position: 47-179
Cow position: chr20:17606880-17606748 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 47-214
Cow position: chr20:13829347-13829519 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 63

Conread position: 51-165
Cow position: chr20:13876620-13876506 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 51-229
Cow position: chr20:17733468-17733285 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 53-174
Cow position: chr20:6473826-6473946 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 54-209
Cow position: chr20:4945160-4944995 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.