Cow genome map
Conread name: | rsug05_n17.y1 |
Conread position: | 1-158 |
Cow position: | chr20:11008209-11008368 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 116 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 1-174 |
Cow position: | chr20:14433383-14433209 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 10, 112 |
Conread position: | 1-174 |
Cow position: | chr20:39417860-39417691 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 122 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 1-205 |
Cow position: | chr20:5814606-5814815 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 146 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 38, 31 |
Conread position: | 1-213 |
Cow position: | chr20:14282959-14283170 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 149 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 27, 176 |
Conread position: | 2-215 |
Cow position: | chr20:15529901-15530119 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 155 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 14, 52 |
Conread position: | 2-222 |
Cow position: | chr20:11359591-11359373 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 153 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 17, 108 |
Conread position: | 3-209 |
Cow position: | chr20:25953305-25953521 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 155 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 29, 106 |
Conread position: | 7-166 |
Cow position: | chr20:23590702-23590543 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 112 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-166 |
Cow position: | chr20:24711887-24712047 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 116 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 7-218 |
Cow position: | chr20:34083762-34083984 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 156 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 85, 123 |
Conread position: | 8-160 |
Cow position: | chr20:22959299-22959148 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 114 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 8-174 |
Cow position: | chr20:10200394-10200560 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 123 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-220 |
Cow position: | chr20:5950595-5950374 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 91, 99 |
Conread position: | 8-225 |
Cow position: | chr20:28249228-28249455 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 152 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 168, 0 |
Conread position: | 13-210 |
Cow position: | chr20:29990394-29990194 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 139 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 167, 41 |
Conread position: | 14-208 |
Cow position: | chr20:12581900-12581709 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 140 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 83, 88 |
Conread position: | 20-174 |
Cow position: | chr20:3141634-3141787 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 110 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 21-173 |
Cow position: | chr20:6054448-6054297 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 111 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 21-173 |
Cow position: | chr20:16291749-16291901 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 11, 19 |
Conread position: | 21-213 |
Cow position: | chr20:17251778-17251966 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 138 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 37-168 |
Cow position: | chr20:30639706-30639572 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 102 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 37-191 |
Cow position: | chr20:5703548-5703703 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 37-201 |
Cow position: | chr20:25474630-25474797 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 88, 59 |
Conread position: | 38-170 |
Cow position: | chr20:39269007-39268876 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 99 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 38-174 |
Cow position: | chr20:354823-354687 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 102 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-178 |
Cow position: | chr20:1824550-1824416 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 38-178 |
Cow position: | chr20:17544702-17544842 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 103 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-213 |
Cow position: | chr20:5365004-5365175 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 125 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 137, 0 |
Conread position: | 38-215 |
Cow position: | chr20:37357934-37358112 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 129 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 142, 164 |
Conread position: | 38-222 |
Cow position: | chr20:27315056-27315233 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 136 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 167, 72 |
Conread position: | 39-158 |
Cow position: | chr20:20202298-20202415 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 39-210 |
Cow position: | chr20:14755761-14755588 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 133 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 127, 86 |
Conread position: | 39-216 |
Cow position: | chr20:11002480-11002667 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 132 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 141, 0 |
Conread position: | 44-201 |
Cow position: | chr20:8442371-8442208 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 106, 74 |
Conread position: | 44-211 |
Cow position: | chr20:2798907-2798739 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 122 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 136, 65 |
Conread position: | 44-214 |
Cow position: | chr20:39016788-39016621 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 119 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 44-222 |
Cow position: | chr20:297924-297748 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 126 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 65, 143 |
Conread position: | 44-222 |
Cow position: | chr20:34097869-34097689 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 129 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 45-213 |
Cow position: | chr20:14490331-14490500 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 135, 75 |
Conread position: | 46-208 |
Cow position: | chr20:19201617-19201786 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 134, 161 |
Conread position: | 46-214 |
Cow position: | chr20:34271413-34271578 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 119 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 46-221 |
Cow position: | chr20:21344553-21344725 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 127 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 47-179 |
Cow position: | chr20:17606880-17606748 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 99 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 47-214 |
Cow position: | chr20:13829347-13829519 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 82, 63 |
Conread position: | 51-165 |
Cow position: | chr20:13876620-13876506 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 89 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 51-229 |
Cow position: | chr20:17733468-17733285 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 131 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 53-174 |
Cow position: | chr20:6473826-6473946 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 95 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 54-209 |
Cow position: | chr20:4945160-4944995 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.