Cow genome map

Conread name: rsug05_n17.y1

Conread position: 1-166
Cow position:
Alignm length: 168
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 132, 0

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 46

Conread position: 1-174
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 1-177
Cow position:
Alignm length: 180
Alignm identity: 126
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 1-195
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 179, 31

Conread position: 1-207
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 119

Conread position: 1-209
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 1-213
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 1-213
Cow position:
Alignm length: 218
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 182, 31

Conread position: 1-216
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 207

Conread position: 1-222
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 208

Conread position: 1-224
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 1-242
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 176

Conread position: 2-208
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 2-213
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 208

Conread position: 3-173
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 40

Conread position: 5-174
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 8-139
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 20

Conread position: 8-178
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 103, 24

Conread position: 8-210
Cow position:
Alignm length: 203
Alignm identity: 137
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 173, 0

Conread position: 8-215
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 167, 0

Conread position: 9-179
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 10-198
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 92, 86

Conread position: 13-174
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 101

Conread position: 14-166
Cow position:
Alignm length: 154
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 14-218
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 157, 108

Conread position: 18-213
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 20-166
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 21-174
Cow position:
Alignm length: 154
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 21-209
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 21-219
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 30

Conread position: 22-206
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 152, 109

Conread position: 22-213
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 0

Conread position: 23-174
Cow position:
Alignm length: 152
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 30-213
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 136, 94

Conread position: 37-160
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 37-173
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 37-174
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 37-174
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 37-209
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 143, 0

Conread position: 37-209
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 87

Conread position: 37-213
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 143, 93

Conread position: 37-220
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 37-222
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 0

Conread position: 37-225
Cow position:
Alignm length: 189
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 37-247
Cow position:
Alignm length: 211
Alignm identity: 138
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 38-208
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 38-209
Cow position:
Alignm length: 173
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 163, 137

Conread position: 38-222
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 38-222
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 38-227
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 39-178
Cow position:
Alignm length: 140
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 39-209
Cow position:
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 149, 66

Conread position: 39-213
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 83

Conread position: 39-225
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 39-258
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 188, 29

Conread position: 40-213
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 136, 0

Conread position: 44-166
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 44-168
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 44-209
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 137, 0

Conread position: 44-210
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 44-213
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 133, 80

Conread position: 44-213
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 44-214
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 136, 0

Conread position: 44-216
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 44-223
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 54, 63

Conread position: 44-224
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 136, 32

Conread position: 44-225
Cow position:
Alignm length: 182
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 44-238
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 136, 62

Conread position: 45-209
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 82

Conread position: 45-210
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 130, 0

Conread position: 45-212
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 0

Conread position: 45-228
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 131, 51

Conread position: 46-174
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 46-209
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 47-214
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 158, 78

Conread position: 48-212
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 50

Conread position: 54-174
Cow position:
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 55-214
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 60-225
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 180-472
Cow position:
Alignm length: 300
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 157, 19

Show alignments to all cow chromosomes.