Cow genome map

Conread name: rsug05_n17.y1

Conread position: 1-187
Cow position: chr24:28990533-28990719 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 99

Conread position: 1-209
Cow position: chr24:14550767-14550976 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 119

Conread position: 1-209
Cow position: chr24:16645348-16645142 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 124

Conread position: 1-210
Cow position: chr24:32191030-32191235 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 4-178
Cow position: chr24:9300602-9300778 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 8-174
Cow position: chr24:32891063-32890903 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 8-207
Cow position: chr24:34272790-34273004 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 8-224
Cow position: chr24:6102811-6103028 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 34

Conread position: 13-148
Cow position: chr24:34008587-34008452 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-158
Cow position: chr24:11028703-11028559 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 13-210
Cow position: chr24:17689625-17689429 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 186, 0

Conread position: 13-213
Cow position: chr24:26880739-26880938 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 34

Conread position: 14-222
Cow position: chr24:17311230-17311033 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 166, 17

Conread position: 14-234
Cow position: chr24:3412670-3412884 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 190, 92

Conread position: 15-174
Cow position: chr24:29586988-29587144 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 21-174
Cow position: chr24:11736076-11735926 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 21-174
Cow position: chr24:29677922-29677766 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 21-178
Cow position: chr24:352612-352456 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 21-210
Cow position: chr24:40025383-40025192 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 149, 65

Conread position: 21-214
Cow position: chr24:161997-162195 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 159, 0

Conread position: 21-222
Cow position: chr24:2992886-2992692 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 23-221
Cow position: chr24:10242787-10242586 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 155, 0

Conread position: 36-177
Cow position: chr24:22419969-22420110 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 37-212
Cow position: chr24:5152533-5152711 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 143, 0

Conread position: 37-226
Cow position: chr24:39911023-39910838 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 37-258
Cow position: chr24:11840197-11840409 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 189, 61

Conread position: 38-221
Cow position: chr24:40055500-40055318 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 39-178
Cow position: chr24:18755769-18755908 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 39-209
Cow position: chr24:30235882-30236058 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 141, 71

Conread position: 39-211
Cow position: chr24:17832809-17832640 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 39-213
Cow position: chr24:24692833-24693016 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 39-215
Cow position: chr24:250526-250340 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 68

Conread position: 42-203
Cow position: chr24:3193260-3193101 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 114

Conread position: 44-174
Cow position: chr24:18874804-18874676 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 44-178
Cow position: chr24:22079479-22079611 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 44-203
Cow position: chr24:24540474-24540322 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 44-208
Cow position: chr24:39523432-39523275 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 44-209
Cow position: chr24:27066247-27066406 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 44-214
Cow position: chr24:20801329-20801153 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 75

Conread position: 44-233
Cow position: chr24:25947845-25947659 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 45-166
Cow position: chr24:16640928-16641049 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 45-222
Cow position: chr24:22567120-22567298 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 46-216
Cow position: chr24:44987356-44987184 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 134, 157

Conread position: 46-220
Cow position: chr24:20017409-20017238 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 46-221
Cow position: chr24:3148217-3148046 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 100

Conread position: 47-174
Cow position: chr24:25122361-25122481 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 47-197
Cow position: chr24:22129618-22129469 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 135, 78

Conread position: 47-214
Cow position: chr24:27284836-27285009 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 160

Conread position: 51-247
Cow position: chr24:21656430-21656621 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 72

Conread position: 61-174
Cow position: chr24:124593-124706 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 204-489
Cow position: chr24:9188681-9188392 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 137, 40

Conread position: 218-475
Cow position: chr24:6025031-6024772 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 128, 26

Show alignments to all cow chromosomes.