Cow genome map
Conread name: | rsug05_n17.y1 |
Conread position: | 1-187 |
Cow position: | chr24:28990533-28990719 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 134 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 15, 99 |
Conread position: | 1-209 |
Cow position: | chr24:14550767-14550976 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 34, 119 |
Conread position: | 1-209 |
Cow position: | chr24:16645348-16645142 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 148 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 31, 124 |
Conread position: | 1-210 |
Cow position: | chr24:32191030-32191235 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 140 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 4-178 |
Cow position: | chr24:9300602-9300778 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 123 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 8-174 |
Cow position: | chr24:32891063-32890903 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 120 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 8-207 |
Cow position: | chr24:34272790-34273004 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 150 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 8-224 |
Cow position: | chr24:6102811-6103028 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 151 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 126, 34 |
Conread position: | 13-148 |
Cow position: | chr24:34008587-34008452 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 101 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-158 |
Cow position: | chr24:11028703-11028559 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 106 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 13-210 |
Cow position: | chr24:17689625-17689429 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 135 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 186, 0 |
Conread position: | 13-213 |
Cow position: | chr24:26880739-26880938 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 142 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 85, 34 |
Conread position: | 14-222 |
Cow position: | chr24:17311230-17311033 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 166, 17 |
Conread position: | 14-234 |
Cow position: | chr24:3412670-3412884 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 151 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 190, 92 |
Conread position: | 15-174 |
Cow position: | chr24:29586988-29587144 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 117 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 21-174 |
Cow position: | chr24:11736076-11735926 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 111 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 21-174 |
Cow position: | chr24:29677922-29677766 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 21-178 |
Cow position: | chr24:352612-352456 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 112 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 21-210 |
Cow position: | chr24:40025383-40025192 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 134 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 149, 65 |
Conread position: | 21-214 |
Cow position: | chr24:161997-162195 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 138 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 159, 0 |
Conread position: | 21-222 |
Cow position: | chr24:2992886-2992692 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 141 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 23-221 |
Cow position: | chr24:10242787-10242586 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 142 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 36-177 |
Cow position: | chr24:22419969-22420110 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 37-212 |
Cow position: | chr24:5152533-5152711 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 127 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 37-226 |
Cow position: | chr24:39911023-39910838 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 134 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 37-258 |
Cow position: | chr24:11840197-11840409 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 153 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 189, 61 |
Conread position: | 38-221 |
Cow position: | chr24:40055500-40055318 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 125 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 39-178 |
Cow position: | chr24:18755769-18755908 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 103 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 39-209 |
Cow position: | chr24:30235882-30236058 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 141, 71 |
Conread position: | 39-211 |
Cow position: | chr24:17832809-17832640 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 122 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 39-213 |
Cow position: | chr24:24692833-24693016 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 131 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 39-215 |
Cow position: | chr24:250526-250340 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 60, 68 |
Conread position: | 42-203 |
Cow position: | chr24:3193260-3193101 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 8, 114 |
Conread position: | 44-174 |
Cow position: | chr24:18874804-18874676 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 44-178 |
Cow position: | chr24:22079479-22079611 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 44-203 |
Cow position: | chr24:24540474-24540322 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 44-208 |
Cow position: | chr24:39523432-39523275 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 44-209 |
Cow position: | chr24:27066247-27066406 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 120 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 44-214 |
Cow position: | chr24:20801329-20801153 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 130 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 121, 75 |
Conread position: | 44-233 |
Cow position: | chr24:25947845-25947659 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 134 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 45-166 |
Cow position: | chr24:16640928-16641049 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 45-222 |
Cow position: | chr24:22567120-22567298 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 122 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 46-216 |
Cow position: | chr24:44987356-44987184 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 134, 157 |
Conread position: | 46-220 |
Cow position: | chr24:20017409-20017238 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 128 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 46-221 |
Cow position: | chr24:3148217-3148046 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 126 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 40, 100 |
Conread position: | 47-174 |
Cow position: | chr24:25122361-25122481 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 100 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 47-197 |
Cow position: | chr24:22129618-22129469 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 115 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 135, 78 |
Conread position: | 47-214 |
Cow position: | chr24:27284836-27285009 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 50, 160 |
Conread position: | 51-247 |
Cow position: | chr24:21656430-21656621 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 138 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 37, 72 |
Conread position: | 61-174 |
Cow position: | chr24:124593-124706 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 91 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 204-489 |
Cow position: | chr24:9188681-9188392 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 198 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 137, 40 |
Conread position: | 218-475 |
Cow position: | chr24:6025031-6024772 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 177 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 128, 26 |
Show alignments to all cow chromosomes.