Cow genome map


           Conread name:
           rsug05_n17.y1
        

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 126
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               175, 31
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 126
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               23, 180
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               31, 172
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               10, 176
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               29, 209
               

               Conread position:
               7-174
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-209
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               173, 114
               

               Conread position:
               7-213
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               8-174
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               8-178
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-210
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               8-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               8-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               158, 44
               

               Conread position:
               8-225
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               13-213
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               13-263
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 113
               

               Conread position:
               14-206
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               18-207
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               20-195
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               20-213
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               146, 56
               

               Conread position:
               21-166
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-173
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               21-197
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               159, 97
               

               Conread position:
               21-206
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               21-208
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 155
               

               Conread position:
               21-208
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               21-209
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               21-210
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               21-212
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               21-220
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               21-222
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               77, 139
               

               Conread position:
               21-224
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               22-210
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               22-212
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               22-222
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               22-247
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 89
               

               Conread position:
               31-170
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               37-160
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               37-166
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               37-174
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               37-197
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               37-199
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               37-209
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 91
               

               Conread position:
               37-213
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               37-213
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               88, 142
               

               Conread position:
               37-215
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               37-222
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 97
               

               Conread position:
               38-178
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               38-198
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               38-213
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               38-213
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               97, 148
               

               Conread position:
               38-214
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               142, 84
               

               Conread position:
               38-220
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               38-222
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               38-225
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               78, 48
               

               Conread position:
               39-174
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               39-205
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               39-213
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               39-213
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               39-231
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 89
               

               Conread position:
               39-239
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 137
               

               Conread position:
               39-240
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               127, 73
               

               Conread position:
               43-224
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               44-166
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               44-173
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               44-174
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               44-210
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               44-210
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               44-217
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 107
               

               Conread position:
               44-236
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               136, 48
               

               Conread position:
               44-255
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               165, 60
               

               Conread position:
               45-213
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               45-214
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 24
               

               Conread position:
               45-221
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               161, 128
               

               Conread position:
               46-165
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               46-206
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               135, 60
               

               Conread position:
               46-208
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               96, 133
               

               Conread position:
               46-208
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               46-221
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               46-222
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               159, 32
               

               Conread position:
               46-223
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               46-224
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               120, 99
               

               Conread position:
               46-225
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               46-244
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               48-209
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               52-210
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               52-223
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               52-229
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               54-197
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               122, 18
               

               Conread position:
               204-452
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               134, 24
               

               Conread position:
               204-473
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 58
               

               Conread position:
               205-475
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               141, 23
               

               Conread position:
               205-482
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               144, 23
               

               Conread position:
               279-490
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               69, 0
               
Show alignments to all cow chromosomes.