Cow genome map

Conread name: rsug05_n17.y1

Conread position: 1-120
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 30

Conread position: 1-175
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 111

Conread position: 1-210
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-210
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 48

Conread position: 1-213
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 67

Conread position: 1-214
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 70

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 36

Conread position: 1-226
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 179, 30

Conread position: 1-227
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 205

Conread position: 3-197
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 29

Conread position: 7-210
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 173, 94

Conread position: 7-215
Cow position:
Alignm length: 212
Alignm identity: 143
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 109, 52

Conread position: 8-166
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-174
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-174
Cow position:
Alignm length: 167
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 0

Conread position: 8-207
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 158, 0

Conread position: 8-213
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 158, 0

Conread position: 8-229
Cow position:
Alignm length: 228
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 156, 36

Conread position: 8-230
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 117

Conread position: 13-174
Cow position:
Alignm length: 162
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-207
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 106

Conread position: 13-214
Cow position:
Alignm length: 202
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 167, 0

Conread position: 13-221
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 167, 189

Conread position: 13-224
Cow position:
Alignm length: 212
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 162, 0

Conread position: 14-173
Cow position:
Alignm length: 160
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-201
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 120

Conread position: 20-177
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 87

Conread position: 20-223
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 160, 119

Conread position: 21-166
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 0

Conread position: 21-174
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 95, 66

Conread position: 21-206
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 21-208
Cow position:
Alignm length: 188
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-210
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 97

Conread position: 23-209
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 143, 89

Conread position: 34-166
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 34-204
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 130, 76

Conread position: 34-247
Cow position:
Alignm length: 214
Alignm identity: 142
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 0

Conread position: 35-223
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 144, 0

Conread position: 36-207
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 36-222
Cow position:
Alignm length: 190
Alignm identity: 129
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 144, 0

Conread position: 37-166
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 37-166
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 37-174
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 37-174
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 37-174
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 37-205
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 139, 0

Conread position: 37-207
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 120

Conread position: 37-218
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 61

Conread position: 37-222
Cow position:
Alignm length: 187
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 122, 163

Conread position: 38-174
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 38-174
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 89, 60

Conread position: 38-208
Cow position:
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 38-209
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 72, 15

Conread position: 38-210
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 38-215
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 87

Conread position: 38-222
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 167, 84

Conread position: 38-222
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 38-242
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 156, 84

Conread position: 39-173
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 39-178
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 134

Conread position: 39-211
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 142, 0

Conread position: 39-213
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 86, 138

Conread position: 39-213
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 0

Conread position: 39-213
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 39-213
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 39-215
Cow position:
Alignm length: 177
Alignm identity: 120
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 39-255
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 128, 79

Conread position: 42-230
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 0

Conread position: 44-174
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 63

Conread position: 44-174
Cow position:
Alignm length: 131
Alignm identity: 98
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 11, 0

Conread position: 44-174
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 44-174
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 44-178
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 44-178
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 44-210
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 44-210
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 56, 0

Conread position: 44-213
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 122, 162

Conread position: 44-213
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 136, 82

Conread position: 44-213
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 136, 0

Conread position: 44-222
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 44-247
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 58

Conread position: 45-206
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 45-210
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 45-247
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 46-207
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 134, 76

Conread position: 46-213
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 61

Conread position: 46-213
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 46-222
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 161, 129

Conread position: 46-222
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 153

Conread position: 46-228
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 120, 0

Conread position: 46-229
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 35, 0

Conread position: 47-200
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 47-219
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 131

Conread position: 51-213
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 51-213
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 129, 70

Conread position: 51-221
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 31

Conread position: 52-166
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 52-213
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 114, 67

Conread position: 54-174
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 54-222
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 17

Conread position: 204-475
Cow position:
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 40

Show alignments to all cow chromosomes.