Cow genome map

Conread name: rsug05_n17.y1

Conread position: 1-167
Cow position: chr7:40710165-40710330 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 127

Conread position: 1-170
Cow position: chr7:37435281-37435452 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-174
Cow position: chr7:38347810-38347636 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 103

Conread position: 1-174
Cow position: chr7:58301901-58301730 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 123

Conread position: 1-178
Cow position: chr7:37022966-37023148 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 1-205
Cow position: chr7:58330791-58330582 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 191

Conread position: 1-210
Cow position: chr7:11487634-11487423 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 48

Conread position: 1-213
Cow position: chr7:16022333-16022538 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 126

Conread position: 1-220
Cow position: chr7:63749438-63749214 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 123

Conread position: 1-238
Cow position: chr7:68857548-68857315 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 161, 169

Conread position: 1-242
Cow position: chr7:1720928-1720692 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 30

Conread position: 1-242
Cow position: chr7:23624628-23624391 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 64

Conread position: 7-174
Cow position: chr7:15650801-15650633 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 7-174
Cow position: chr7:39022164-39021997 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-213
Cow position: chr7:8387368-8387153 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 173, 161

Conread position: 7-223
Cow position: chr7:249459-249250 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 7-232
Cow position: chr7:43450585-43450811 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 182

Conread position: 8-214
Cow position: chr7:8777255-8777463 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 91

Conread position: 8-222
Cow position: chr7:47931749-47931536 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 166, 0

Conread position: 8-224
Cow position: chr7:58800216-58800427 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 8-225
Cow position: chr7:3304624-3304840 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 8-247
Cow position: chr7:46963786-46964030 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 168, 211

Conread position: 13-160
Cow position: chr7:10384929-10385077 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 101

Conread position: 13-211
Cow position: chr7:53996352-53996552 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 167, 155

Conread position: 13-213
Cow position: chr7:50442842-50442646 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 14-205
Cow position: chr7:47513631-47513438 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 162, 48

Conread position: 14-221
Cow position: chr7:49417659-49417860 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 14-222
Cow position: chr7:36996415-36996612 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 14-244
Cow position: chr7:36665378-36665603 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 62

Conread position: 15-174
Cow position: chr7:28047624-28047783 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-175
Cow position: chr7:13067216-13067371 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-174
Cow position: chr7:53834531-53834378 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-174
Cow position: chr7:54367553-54367706 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-204
Cow position: chr7:15534015-15533835 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 150, 97

Conread position: 21-207
Cow position: chr7:40311002-40310814 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 101

Conread position: 21-210
Cow position: chr7:27290439-27290253 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 145, 0

Conread position: 21-210
Cow position: chr7:51685074-51685268 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 184

Conread position: 21-213
Cow position: chr7:6469681-6469878 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 21-213
Cow position: chr7:17000786-17000978 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 21-214
Cow position: chr7:41293686-41293491 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 143, 100

Conread position: 21-222
Cow position: chr7:9068540-9068337 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 68, 159

Conread position: 21-243
Cow position: chr7:20181139-20180930 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 105

Conread position: 21-244
Cow position: chr7:39947189-39946972 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 141, 101

Conread position: 22-174
Cow position: chr7:8658576-8658724 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 22-178
Cow position: chr7:29505176-29505326 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 22-222
Cow position: chr7:20534933-20535126 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 22-243
Cow position: chr7:18388338-18388118 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 210, 154

Conread position: 23-255
Cow position: chr7:8025411-8025648 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 183

Conread position: 36-158
Cow position: chr7:49636141-49636014 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 36-158
Cow position: chr7:49745532-49745659 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 36-209
Cow position: chr7:17772244-17772062 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 37-139
Cow position: chr7:8088821-8088719 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 58

Conread position: 37-174
Cow position: chr7:10945423-10945560 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 70

Conread position: 37-174
Cow position: chr7:32920525-32920389 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 71

Conread position: 37-201
Cow position: chr7:37651572-37651745 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 70

Conread position: 37-208
Cow position: chr7:18958465-18958299 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 37-208
Cow position: chr7:25860130-25859956 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 166

Conread position: 37-210
Cow position: chr7:44942633-44942799 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 37-213
Cow position: chr7:12330150-12329980 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 37-213
Cow position: chr7:39093850-39093666 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 37-228
Cow position: chr7:43853254-43853066 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 102

Conread position: 38-174
Cow position: chr7:25263445-25263580 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 38-174
Cow position: chr7:35754749-35754885 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 38-205
Cow position: chr7:68540523-68540358 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 128, 136

Conread position: 38-210
Cow position: chr7:40688019-40688186 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 38-213
Cow position: chr7:21228472-21228300 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 121, 82

Conread position: 38-215
Cow position: chr7:41122190-41122022 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 38-223
Cow position: chr7:35088734-35088915 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 137, 0

Conread position: 38-239
Cow position: chr7:34216286-34216486 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 60

Conread position: 39-166
Cow position: chr7:46823748-46823875 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 39-220
Cow position: chr7:35793153-35793331 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 177, 136

Conread position: 39-222
Cow position: chr7:59688617-59688796 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 39-225
Cow position: chr7:40008907-40009090 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 93

Conread position: 39-239
Cow position: chr7:49068763-49068562 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 127, 189

Conread position: 40-213
Cow position: chr7:28337313-28337491 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 136, 72

Conread position: 44-174
Cow position: chr7:37697888-37698018 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 44-174
Cow position: chr7:58615348-58615477 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 44-177
Cow position: chr7:32813526-32813659 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 44-178
Cow position: chr7:53862595-53862722 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 44-210
Cow position: chr7:49942048-49941878 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 122, 47

Conread position: 44-212
Cow position: chr7:33370475-33370648 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 137, 80

Conread position: 44-213
Cow position: chr7:31885676-31885852 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 73

Conread position: 44-213
Cow position: chr7:62603260-62603428 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 44-218
Cow position: chr7:39144775-39144950 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 84

Conread position: 44-222
Cow position: chr7:46051739-46051915 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 133

Conread position: 44-224
Cow position: chr7:9077727-9077539 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 82

Conread position: 44-224
Cow position: chr7:25415477-25415655 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 156, 0

Conread position: 44-266
Cow position: chr7:13606536-13606771 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 179

Conread position: 46-174
Cow position: chr7:19797844-19797716 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 46-210
Cow position: chr7:14191661-14191491 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 61

Conread position: 46-210
Cow position: chr7:27062859-27063029 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 39

Conread position: 46-214
Cow position: chr7:63300281-63300457 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 47-225
Cow position: chr7:42222852-42222674 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 51

Conread position: 50-231
Cow position: chr7:35651641-35651455 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 49

Conread position: 51-197
Cow position: chr7:53211308-53211451 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 71

Conread position: 51-215
Cow position: chr7:10466649-10466488 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 51-219
Cow position: chr7:16285487-16285312 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 32

Conread position: 52-213
Cow position: chr7:30290854-30290686 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 128, 47

Conread position: 53-209
Cow position: chr7:50432601-50432443 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 113, 70

Conread position: 54-166
Cow position: chr7:54038027-54037915 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.