Cow genome map

Conread name: rsug05_n17.y1

Conread position: 1-166
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 88

Conread position: 1-174
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 1-174
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 84

Conread position: 1-195
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 1-206
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 100

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 187

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 179, 51

Conread position: 1-221
Cow position:
Alignm length: 223
Alignm identity: 150
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 102

Conread position: 1-222
Cow position:
Alignm length: 223
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 203, 20

Conread position: 1-222
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 122

Conread position: 1-222
Cow position:
Alignm length: 232
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 1-222
Cow position:
Alignm length: 223
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 205, 31

Conread position: 2-139
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 2-166
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 3-226
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 163, 17

Conread position: 7-215
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 7-222
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 173, 111

Conread position: 8-166
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 104

Conread position: 8-174
Cow position:
Alignm length: 167
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-174
Cow position:
Alignm length: 167
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 8-175
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 8-205
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 172, 114

Conread position: 8-208
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 118

Conread position: 8-210
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 8-212
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 166, 0

Conread position: 8-215
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 117, 201

Conread position: 8-215
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 167, 0

Conread position: 8-220
Cow position:
Alignm length: 216
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 158, 63

Conread position: 8-221
Cow position:
Alignm length: 214
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 8-222
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 158, 164

Conread position: 8-255
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 158, 212

Conread position: 13-206
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 13-209
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 86

Conread position: 13-222
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 13-226
Cow position:
Alignm length: 217
Alignm identity: 144
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 188, 162

Conread position: 13-244
Cow position:
Alignm length: 235
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 13-248
Cow position:
Alignm length: 237
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 191, 0

Conread position: 14-213
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 166, 111

Conread position: 14-215
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 130, 0

Conread position: 18-174
Cow position:
Alignm length: 157
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-174
Cow position:
Alignm length: 156
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 146, 0

Conread position: 21-166
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 21-170
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 21-212
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 21-213
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 149, 85

Conread position: 21-213
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 155, 99

Conread position: 21-214
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 155, 57

Conread position: 21-215
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 159, 0

Conread position: 21-220
Cow position:
Alignm length: 200
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 21-222
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 184, 123

Conread position: 21-222
Cow position:
Alignm length: 202
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 21-222
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 71

Conread position: 21-244
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 175, 58

Conread position: 21-253
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 162, 101

Conread position: 24-166
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 44

Conread position: 24-197
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 156, 0

Conread position: 34-178
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 37-174
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 37-174
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 37-207
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 37-208
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 129, 88

Conread position: 37-220
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 131, 0

Conread position: 37-222
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 88, 58

Conread position: 37-244
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 61

Conread position: 37-247
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 129, 73

Conread position: 38-173
Cow position:
Alignm length: 136
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 38-174
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 38-174
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 128, 122

Conread position: 38-174
Cow position:
Alignm length: 137
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 38-174
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 38-197
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 88

Conread position: 38-209
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 104

Conread position: 38-210
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 141, 0

Conread position: 38-213
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 138, 87

Conread position: 38-213
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 93

Conread position: 38-213
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 0

Conread position: 38-214
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 125

Conread position: 38-215
Cow position:
Alignm length: 178
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 38-222
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 143

Conread position: 38-229
Cow position:
Alignm length: 192
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 137, 0

Conread position: 39-166
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 68

Conread position: 39-169
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 39-174
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 68

Conread position: 39-174
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 39-197
Cow position:
Alignm length: 160
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 39-197
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 39-209
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 39-209
Cow position:
Alignm length: 172
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 161, 0

Conread position: 39-210
Cow position:
Alignm length: 172
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 137, 0

Conread position: 39-212
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 141, 167

Conread position: 39-213
Cow position:
Alignm length: 175
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 44-166
Cow position:
Alignm length: 123
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 44-174
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 44-197
Cow position:
Alignm length: 154
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 44-208
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 74

Conread position: 44-210
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 136, 156

Conread position: 44-215
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 44-222
Cow position:
Alignm length: 181
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 161, 131

Conread position: 44-222
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 79

Conread position: 45-174
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 46-166
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 46-174
Cow position:
Alignm length: 129
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 46-174
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 46-210
Cow position:
Alignm length: 165
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 46-212
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 134, 103

Conread position: 46-214
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 134, 73

Conread position: 46-214
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 130, 76

Conread position: 46-220
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 140, 97

Conread position: 46-223
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 46-240
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 47-222
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 48-220
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 126, 74

Conread position: 48-247
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 127, 0

Conread position: 51-197
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 115, 71

Conread position: 51-214
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 70

Conread position: 51-214
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 67, 158

Conread position: 52-211
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 54-207
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 57-213
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 138, 68

Conread position: 203-475
Cow position:
Alignm length: 280
Alignm identity: 192
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 137, 15

Show alignments to all cow chromosomes.