Cow genome map


           Conread name:
           rsug15_c22.y1
        

               Conread position:
               1-150
               

               Cow position:
               chr22:36554353-36554205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-349
               

               Cow position:
               chr22:36593126-36592783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 224
               

               Conread position:
               1-358
               

               Cow position:
               chr22:12562996-12562638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 52
               

               Conread position:
               1-436
               

               Cow position:
               chr22:10964396-10964819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-445
               

               Cow position:
               chr22:293947-293517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 9
               

               Conread position:
               1-539
               

               Cow position:
               chr22:35944194-35943667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               540
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               462, 55
               

               Conread position:
               2-357
               

               Cow position:
               chr22:299335-298986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 22
               

               Conread position:
               6-461
               

               Cow position:
               chr22:8873079-8873534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 72
               

               Conread position:
               462-654
               

               Cow position:
               chr22:36580922-36580718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               42, 160
               

               Conread position:
               462-658
               

               Cow position:
               chr22:36552846-36552650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 38
               
Show alignments to all cow chromosomes.