Cow genome map
| Conread name: | rtes03_h21.y1 |
| Conread position: | 1-232 |
| Cow position: | chr29:20016843-20017073 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 152, 48 |
| Conread position: | 1-235 |
| Cow position: | chr29:19989193-19989427 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-391 |
| Cow position: | chr29:19929350-19928960 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 318 |
| Conread position: | 1-543 |
| Cow position: | chr29:21273392-21272850 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 440, 449 |
| Conread position: | 1-543 |
| Cow position: | chr29:21297451-21296909 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 440, 447 |
| Conread position: | 1-544 |
| Cow position: | chr29:19951189-19950643 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 448, 314 |
| Conread position: | 1-545 |
| Cow position: | chr29:18771730-18771189 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 331 |
| Conread position: | 1-545 |
| Cow position: | chr29:18777156-18776612 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 318 |
| Conread position: | 1-545 |
| Cow position: | chr29:19901871-19901327 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 302 |
| Conread position: | 1-545 |
| Cow position: | chr29:19914533-19913989 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 318 |
| Conread position: | 1-545 |
| Cow position: | chr29:19925921-19925385 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 98 |
| Conread position: | 1-545 |
| Cow position: | chr29:19939004-19938460 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 443, 450 |
| Conread position: | 1-545 |
| Cow position: | chr29:19962328-19961786 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 37 |
| Conread position: | 1-545 |
| Cow position: | chr29:19971857-19971305 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 77 |
| Conread position: | 1-545 |
| Cow position: | chr29:20019663-20020206 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 112 |
| Conread position: | 1-545 |
| Cow position: | chr29:20030753-20031297 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 145 |
| Conread position: | 1-545 |
| Cow position: | chr29:20192691-20192150 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 112 |
| Conread position: | 1-545 |
| Cow position: | chr29:21176489-21177030 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 1-545 |
| Cow position: | chr29:21187716-21188257 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 1-545 |
| Cow position: | chr29:21202696-21202152 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 443, 449 |
| Conread position: | 1-545 |
| Cow position: | chr29:21207284-21207825 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 0 |
| Conread position: | 1-545 |
| Cow position: | chr29:21230162-21229618 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 443, 449 |
| Conread position: | 1-545 |
| Cow position: | chr29:21328566-21328022 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-545 |
| Cow position: | chr29:21346185-21345644 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 440, 447 |
| Conread position: | 1-545 |
| Cow position: | chr29:21440616-21441157 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 440, 450 |
| Conread position: | 1-545 |
| Cow position: | chr29:21464812-21464268 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-545 |
| Cow position: | chr29:21482774-21482233 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 331 |
| Conread position: | 1-545 |
| Cow position: | chr29:21488230-21487686 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-545 |
| Cow position: | chr29:19979046-19979583 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 4-545 |
| Cow position: | chr29:19992467-19993006 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 4-545 |
| Cow position: | chr29:20003236-20003775 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 9 |
| Conread position: | 4-545 |
| Cow position: | chr29:21248639-21249177 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 0 |
| Conread position: | 12-406 |
| Cow position: | chr29:18686002-18686393 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 129, 101 |
| Conread position: | 12-406 |
| Cow position: | chr29:18703975-18704366 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 129, 101 |
| Conread position: | 12-492 |
| Cow position: | chr29:18714609-18715086 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 300 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 129, 103 |
| Conread position: | 17-545 |
| Cow position: | chr29:18741067-18741595 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 275 |
| Conread position: | 19-406 |
| Cow position: | chr29:18725759-18726143 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 122, 94 |
Show alignments to all cow chromosomes.