Cow genome map

Conread name: rtes03_h21.y1

Conread position: 1-232
Cow position:
Alignm length: 233
Alignm identity: 153
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 152, 48

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-391
Cow position:
Alignm length: 392
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 318

Conread position: 1-543
Cow position:
Alignm length: 544
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 449

Conread position: 1-543
Cow position:
Alignm length: 544
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 447

Conread position: 1-544
Cow position:
Alignm length: 551
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 314

Conread position: 1-545
Cow position:
Alignm length: 546
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 331

Conread position: 1-545
Cow position:
Alignm length: 548
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 318

Conread position: 1-545
Cow position:
Alignm length: 547
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 302

Conread position: 1-545
Cow position:
Alignm length: 547
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 318

Conread position: 1-545
Cow position:
Alignm length: 549
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 98

Conread position: 1-545
Cow position:
Alignm length: 546
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 443, 450

Conread position: 1-545
Cow position:
Alignm length: 547
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 37

Conread position: 1-545
Cow position:
Alignm length: 560
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 77

Conread position: 1-545
Cow position:
Alignm length: 547
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 112

Conread position: 1-545
Cow position:
Alignm length: 547
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 145

Conread position: 1-545
Cow position:
Alignm length: 547
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 112

Conread position: 1-545
Cow position:
Alignm length: 545
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-545
Cow position:
Alignm length: 545
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-545
Cow position:
Alignm length: 546
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 443, 449

Conread position: 1-545
Cow position:
Alignm length: 545
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 1-545
Cow position:
Alignm length: 546
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 443, 449

Conread position: 1-545
Cow position:
Alignm length: 545
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-545
Cow position:
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 447

Conread position: 1-545
Cow position:
Alignm length: 546
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 450

Conread position: 1-545
Cow position:
Alignm length: 545
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-545
Cow position:
Alignm length: 546
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 331

Conread position: 1-545
Cow position:
Alignm length: 545
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-545
Cow position:
Alignm length: 544
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 9

Conread position: 4-545
Cow position:
Alignm length: 544
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 9

Conread position: 4-545
Cow position:
Alignm length: 544
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 9

Conread position: 4-545
Cow position:
Alignm length: 542
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 12-406
Cow position:
Alignm length: 402
Alignm identity: 253
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 129, 101

Conread position: 12-406
Cow position:
Alignm length: 402
Alignm identity: 250
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 129, 101

Conread position: 12-492
Cow position:
Alignm length: 488
Alignm identity: 300
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 129, 103

Conread position: 17-545
Cow position:
Alignm length: 532
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 275

Conread position: 19-406
Cow position:
Alignm length: 395
Alignm identity: 246
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 122, 94

Show alignments to all cow chromosomes.