Cow genome map
Conread name: | rtes07_h2r1.y1 |
Conread position: | 1-233 |
Cow position: | chr1:88532869-88532641 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 175 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 200, 131 |
Conread position: | 1-398 |
Cow position: | chr1:82408671-82408261 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 59 |
Conread position: | 1-489 |
Cow position: | chr1:101760408-101760904 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 319 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 63, 57 |
Conread position: | 1-502 |
Cow position: | chr1:42177128-42176646 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 9 |
Conread position: | 1-502 |
Cow position: | chr1:82346800-82346297 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 19 |
Conread position: | 5-161 |
Cow position: | chr1:84777542-84777699 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 10-227 |
Cow position: | chr1:78359597-78359812 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 151 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 109, 139 |
Conread position: | 10-396 |
Cow position: | chr1:54366521-54366143 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 46 |
Conread position: | 10-501 |
Cow position: | chr1:86608449-86608943 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 57 |
Conread position: | 10-502 |
Cow position: | chr1:76704102-76703628 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 110 |
Conread position: | 11-501 |
Cow position: | chr1:5318022-5318505 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 47 |
Conread position: | 12-229 |
Cow position: | chr1:72119165-72119384 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 159 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 12-397 |
Cow position: | chr1:23049907-23050281 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 106 |
Conread position: | 12-502 |
Cow position: | chr1:20988015-20988507 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 17 |
Conread position: | 13-166 |
Cow position: | chr1:13879662-13879514 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 13-398 |
Cow position: | chr1:84479070-84479426 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 59 |
Conread position: | 13-502 |
Cow position: | chr1:25887883-25887397 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 331 |
Conread position: | 16-335 |
Cow position: | chr1:69059690-69060010 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 171 |
Conread position: | 16-502 |
Cow position: | chr1:67903172-67902678 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 329 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 37, 29 |
Conread position: | 16-502 |
Cow position: | chr1:72134686-72135179 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 32 |
Conread position: | 17-396 |
Cow position: | chr1:29032527-29032908 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 139 |
Conread position: | 18-256 |
Cow position: | chr1:31594214-31594452 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 105, 16 |
Conread position: | 20-489 |
Cow position: | chr1:98662021-98661564 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 49 |
Conread position: | 27-502 |
Cow position: | chr1:58180484-58180021 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 54 |
Conread position: | 48-354 |
Cow position: | chr1:69288263-69287952 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 0 |
Conread position: | 58-335 |
Cow position: | chr1:52323192-52323474 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 197 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 64, 9 |
Conread position: | 62-326 |
Cow position: | chr1:89478488-89478754 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 198 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 60, 206 |
Conread position: | 83-487 |
Cow position: | chr1:20396739-20397137 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 273 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 12, 55 |
Conread position: | 92-501 |
Cow position: | chr1:61732386-61732799 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 288 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 31, 91 |
Conread position: | 136-501 |
Cow position: | chr1:53046573-53046204 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 272 |
Conread position: | 137-488 |
Cow position: | chr1:49974814-49974464 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 232 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 58, 33 |
Conread position: | 139-497 |
Cow position: | chr1:7145338-7144981 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 232 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 41, 91 |
Conread position: | 139-502 |
Cow position: | chr1:101149229-101149581 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 240 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 90, 63 |
Conread position: | 142-283 |
Cow position: | chr1:102555184-102555331 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 143-502 |
Cow position: | chr1:34688734-34689090 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 247 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 61, 89 |
Conread position: | 146-488 |
Cow position: | chr1:55324148-55323795 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 248 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 8, 201 |
Conread position: | 151-321 |
Cow position: | chr1:13878362-13878191 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 134 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 46, 102 |
Conread position: | 151-502 |
Cow position: | chr1:56194548-56194193 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 238 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 24, 185 |
Conread position: | 152-500 |
Cow position: | chr1:63500842-63501197 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 235 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 15, 23 |
Conread position: | 158-359 |
Cow position: | chr1:28722213-28722420 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 143 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 44, 174 |
Conread position: | 158-502 |
Cow position: | chr1:33711458-33711799 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 225 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 45, 189 |
Conread position: | 168-315 |
Cow position: | chr1:53364101-53364250 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 39, 144 |
Conread position: | 169-488 |
Cow position: | chr1:17942423-17942088 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 224 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 34, 250 |
Conread position: | 172-502 |
Cow position: | chr1:3934739-3934415 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 218 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 23, 153 |
Conread position: | 174-488 |
Cow position: | chr1:57367725-57367408 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 214 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 21, 170 |
Conread position: | 207-502 |
Cow position: | chr1:37420531-37420233 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 207 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 19, 146 |
Show alignments to all cow chromosomes.