Cow genome map
| Conread name: | rtes07_h2r1.y1 |
| Conread position: | 1-143 |
| Cow position: | chr10:64466952-64466803 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-227 |
| Cow position: | chr10:2076100-2075857 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 74, 207 |
| Conread position: | 1-286 |
| Cow position: | chr10:3544267-3543996 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 120, 78 |
| Conread position: | 1-329 |
| Cow position: | chr10:38152169-38151847 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 193, 82 |
| Conread position: | 1-389 |
| Cow position: | chr10:28892165-28891776 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 64 |
| Conread position: | 1-502 |
| Cow position: | chr10:14886579-14886082 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 1-502 |
| Cow position: | chr10:24299594-24299085 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 394 |
| Conread position: | 11-501 |
| Cow position: | chr10:14950998-14951478 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 40 |
| Conread position: | 12-374 |
| Cow position: | chr10:20536712-20537072 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 151 |
| Conread position: | 12-485 |
| Cow position: | chr10:49309815-49310283 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 350 |
| Conread position: | 12-501 |
| Cow position: | chr10:42109023-42109494 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 113, 32 |
| Conread position: | 12-501 |
| Cow position: | chr10:42747393-42747864 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 32 |
| Conread position: | 12-502 |
| Cow position: | chr10:15862994-15862536 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 334 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 191, 114 |
| Conread position: | 13-501 |
| Cow position: | chr10:38526002-38526492 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 107, 87 |
| Conread position: | 16-267 |
| Cow position: | chr10:38846690-38846946 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 50-502 |
| Cow position: | chr10:60488965-60489431 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 138 |
| Conread position: | 68-272 |
| Cow position: | chr10:42682811-42683017 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 91-272 |
| Cow position: | chr10:42663642-42663825 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 91-502 |
| Cow position: | chr10:32063494-32063914 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 132-502 |
| Cow position: | chr10:46190776-46191152 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 133-501 |
| Cow position: | chr10:4499099-4499477 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 57 |
| Conread position: | 139-481 |
| Cow position: | chr10:2422377-2422024 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 150-502 |
| Cow position: | chr10:21486326-21486678 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 154-488 |
| Cow position: | chr10:7283269-7282935 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 8, 191 |
| Conread position: | 154-501 |
| Cow position: | chr10:21901769-21901428 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 158-502 |
| Cow position: | chr10:25497779-25498117 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 168 |
| Conread position: | 159-498 |
| Cow position: | chr10:182961-183302 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 171-500 |
| Cow position: | chr10:34318822-34318497 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 193 |
| Conread position: | 173-502 |
| Cow position: | chr10:38345943-38345601 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 181 |
| Conread position: | 174-502 |
| Cow position: | chr10:32650172-32650503 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 21, 170 |
| Conread position: | 177-498 |
| Cow position: | chr10:21382150-21382471 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 203-485 |
| Cow position: | chr10:14859450-14859729 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 262-501 |
| Cow position: | chr10:58378031-58377803 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 309-502 |
| Cow position: | chr10:38846952-38847136 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.