Cow genome map
| Conread name: | rtes07_h2r1.y1 |
| Conread position: | 1-165 |
| Cow position: | chr11:8249108-8248948 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 124, 48 |
| Conread position: | 1-244 |
| Cow position: | chr11:1601787-1602027 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 22 |
| Conread position: | 2-146 |
| Cow position: | chr11:17910526-17910382 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 121, 32 |
| Conread position: | 10-451 |
| Cow position: | chr11:28050864-28050412 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 291 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 113, 35 |
| Conread position: | 11-268 |
| Cow position: | chr11:31755729-31755466 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 12-253 |
| Cow position: | chr11:7110970-7110725 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 111, 77 |
| Conread position: | 12-384 |
| Cow position: | chr11:32682584-32682960 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 12-502 |
| Cow position: | chr11:65162620-65162134 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 75 |
| Conread position: | 13-232 |
| Cow position: | chr11:11124376-11124595 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 113, 21 |
| Conread position: | 13-500 |
| Cow position: | chr11:3237468-3237943 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 16-486 |
| Cow position: | chr11:81853683-81853202 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 405 |
| Conread position: | 16-502 |
| Cow position: | chr11:49076728-49076262 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 12 |
| Conread position: | 24-502 |
| Cow position: | chr11:64355138-64355608 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 101, 78 |
| Conread position: | 25-502 |
| Cow position: | chr11:7686820-7687314 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 112 |
| Conread position: | 33-498 |
| Cow position: | chr11:87126790-87127240 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 81 |
| Conread position: | 39-502 |
| Cow position: | chr11:72017157-72017628 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 25 |
| Conread position: | 58-363 |
| Cow position: | chr11:8894930-8895251 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 62, 113 |
| Conread position: | 59-502 |
| Cow position: | chr11:44507142-44507573 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 69-500 |
| Cow position: | chr11:25180065-25180478 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 113 |
| Conread position: | 72-502 |
| Cow position: | chr11:42428311-42428736 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 91-358 |
| Cow position: | chr11:59434177-59433904 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 34, 155 |
| Conread position: | 91-500 |
| Cow position: | chr11:21440616-21441021 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 93-418 |
| Cow position: | chr11:25181823-25182154 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 95-487 |
| Cow position: | chr11:62217062-62216667 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 114-501 |
| Cow position: | chr11:72005059-72005440 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 128-299 |
| Cow position: | chr11:17907602-17907435 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 71, 94 |
| Conread position: | 139-501 |
| Cow position: | chr11:43731469-43731825 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 58, 142 |
| Conread position: | 147-485 |
| Cow position: | chr11:72110917-72110576 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 48, 197 |
| Conread position: | 148-502 |
| Cow position: | chr11:27283017-27283387 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 158 |
| Conread position: | 149-487 |
| Cow position: | chr11:7112492-7112843 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 152-501 |
| Cow position: | chr11:87171507-87171845 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 158-362 |
| Cow position: | chr11:25526654-25526865 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 177 |
| Conread position: | 158-500 |
| Cow position: | chr11:44496531-44496183 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 146 |
| Conread position: | 158-502 |
| Cow position: | chr11:8888088-8887750 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 167 |
| Conread position: | 167-425 |
| Cow position: | chr11:56178983-56179241 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 172-502 |
| Cow position: | chr11:53432702-53432369 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 23, 172 |
| Conread position: | 174-488 |
| Cow position: | chr11:58133425-58133744 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 172 |
Show alignments to all cow chromosomes.