Cow genome map
Conread name: | rtes07_h2r1.y1 |
Conread position: | 1-475 |
Cow position: | chr15:45885661-45886128 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 89 |
Conread position: | 1-498 |
Cow position: | chr15:12613915-12614413 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 103 |
Conread position: | 1-502 |
Cow position: | chr15:40104299-40104794 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 6 |
Conread position: | 3-278 |
Cow position: | chr15:17683860-17683581 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 64 |
Conread position: | 3-498 |
Cow position: | chr15:1662241-1662733 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 26 |
Conread position: | 8-344 |
Cow position: | chr15:1236272-1236616 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 10-489 |
Cow position: | chr15:6327274-6326828 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 324 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 58, 47 |
Conread position: | 10-502 |
Cow position: | chr15:10479839-10479350 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 163 |
Conread position: | 10-502 |
Cow position: | chr15:11299845-11299366 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 153 |
Conread position: | 12-219 |
Cow position: | chr15:684564-684772 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 155 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 111, 17 |
Conread position: | 12-266 |
Cow position: | chr15:16539937-16540181 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 178 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 186, 58 |
Conread position: | 12-502 |
Cow position: | chr15:4631072-4630570 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 22 |
Conread position: | 16-321 |
Cow position: | chr15:12364255-12364562 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 215 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 105, 116 |
Conread position: | 17-281 |
Cow position: | chr15:24715017-24715280 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 201 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 103, 94 |
Conread position: | 21-502 |
Cow position: | chr15:21816885-21816397 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 144 |
Conread position: | 25-502 |
Cow position: | chr15:323788-324270 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 146 |
Conread position: | 36-502 |
Cow position: | chr15:32605944-32605487 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 28 |
Conread position: | 41-486 |
Cow position: | chr15:36627730-36627276 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 65 |
Conread position: | 42-238 |
Cow position: | chr15:3845267-3845071 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 148 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 77, 98 |
Conread position: | 59-502 |
Cow position: | chr15:15266894-15266442 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 52 |
Conread position: | 64-502 |
Cow position: | chr15:21447977-21448418 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 18 |
Conread position: | 81-283 |
Cow position: | chr15:51799401-51799609 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 150 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 89-498 |
Cow position: | chr15:7540905-7541316 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 275 |
Conread position: | 91-492 |
Cow position: | chr15:17219914-17219532 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 257 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 31, 78 |
Conread position: | 91-501 |
Cow position: | chr15:7927566-7927973 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 266 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 113, 29 |
Conread position: | 100-450 |
Cow position: | chr15:10576363-10576701 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 209 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 21, 95 |
Conread position: | 124-397 |
Cow position: | chr15:16506115-16506402 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 210 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 85, 194 |
Conread position: | 137-502 |
Cow position: | chr15:51215572-51215937 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 249 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 16, 24 |
Conread position: | 141-502 |
Cow position: | chr15:15348137-15347777 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 232 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 99, 26 |
Conread position: | 142-502 |
Cow position: | chr15:52635140-52635509 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 46 |
Conread position: | 147-502 |
Cow position: | chr15:35681662-35681313 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 243 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 62, 183 |
Conread position: | 150-485 |
Cow position: | chr15:525860-525526 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 226 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 27, 154 |
Conread position: | 150-498 |
Cow position: | chr15:2006533-2006879 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 231 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 7, 58 |
Conread position: | 151-488 |
Cow position: | chr15:21667029-21666690 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 226 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 44, 183 |
Conread position: | 154-486 |
Cow position: | chr15:6387308-6386966 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 229 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 49, 42 |
Conread position: | 154-488 |
Cow position: | chr15:24793055-24793386 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 232 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 49, 80 |
Conread position: | 154-502 |
Cow position: | chr15:32680570-32680201 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 237 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 55, 129 |
Conread position: | 156-488 |
Cow position: | chr15:35649206-35648885 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 223 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 47, 11 |
Conread position: | 158-375 |
Cow position: | chr15:21960530-21960753 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 153 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 45, 177 |
Conread position: | 158-480 |
Cow position: | chr15:53338048-53338384 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 217 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 260 |
Conread position: | 158-502 |
Cow position: | chr15:370685-370321 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 243 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 158-502 |
Cow position: | chr15:10788083-10787746 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 225 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 40, 159 |
Conread position: | 164-502 |
Cow position: | chr15:35734468-35734808 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 226 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 21, 48 |
Conread position: | 174-485 |
Cow position: | chr15:6156949-6156634 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 208 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 21, 164 |
Conread position: | 174-488 |
Cow position: | chr15:7933003-7933307 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 211 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 31, 76 |
Conread position: | 208-502 |
Cow position: | chr15:685211-685508 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 208 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 21, 41 |
Conread position: | 285-501 |
Cow position: | chr15:17788013-17787802 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 147 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 7, 39 |
Conread position: | 285-502 |
Cow position: | chr15:17683069-17682852 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 155 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 88, 28 |
Conread position: | 361-502 |
Cow position: | chr15:3902963-3903108 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.