Cow genome map

Conread name: rtes07_h2r1.y1

Conread position: 1-475
Cow position: chr15:45885661-45886128 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 89

Conread position: 1-498
Cow position: chr15:12613915-12614413 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 103

Conread position: 1-502
Cow position: chr15:40104299-40104794 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 6

Conread position: 3-278
Cow position: chr15:17683860-17683581 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 64

Conread position: 3-498
Cow position: chr15:1662241-1662733 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 26

Conread position: 8-344
Cow position: chr15:1236272-1236616 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 10-489
Cow position: chr15:6327274-6326828 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 324
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 47

Conread position: 10-502
Cow position: chr15:10479839-10479350 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 163

Conread position: 10-502
Cow position: chr15:11299845-11299366 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 153

Conread position: 12-219
Cow position: chr15:684564-684772 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 111, 17

Conread position: 12-266
Cow position: chr15:16539937-16540181 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 186, 58

Conread position: 12-502
Cow position: chr15:4631072-4630570 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 22

Conread position: 16-321
Cow position: chr15:12364255-12364562 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 105, 116

Conread position: 17-281
Cow position: chr15:24715017-24715280 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 103, 94

Conread position: 21-502
Cow position: chr15:21816885-21816397 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 144

Conread position: 25-502
Cow position: chr15:323788-324270 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 146

Conread position: 36-502
Cow position: chr15:32605944-32605487 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 28

Conread position: 41-486
Cow position: chr15:36627730-36627276 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 65

Conread position: 42-238
Cow position: chr15:3845267-3845071 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 77, 98

Conread position: 59-502
Cow position: chr15:15266894-15266442 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 52

Conread position: 64-502
Cow position: chr15:21447977-21448418 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 18

Conread position: 81-283
Cow position: chr15:51799401-51799609 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 89-498
Cow position: chr15:7540905-7541316 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 275

Conread position: 91-492
Cow position: chr15:17219914-17219532 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 257
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 78

Conread position: 91-501
Cow position: chr15:7927566-7927973 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 266
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 113, 29

Conread position: 100-450
Cow position: chr15:10576363-10576701 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 95

Conread position: 124-397
Cow position: chr15:16506115-16506402 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 85, 194

Conread position: 137-502
Cow position: chr15:51215572-51215937 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 24

Conread position: 141-502
Cow position: chr15:15348137-15347777 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 232
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 99, 26

Conread position: 142-502
Cow position: chr15:52635140-52635509 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 46

Conread position: 147-502
Cow position: chr15:35681662-35681313 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 62, 183

Conread position: 150-485
Cow position: chr15:525860-525526 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 226
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 154

Conread position: 150-498
Cow position: chr15:2006533-2006879 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 58

Conread position: 151-488
Cow position: chr15:21667029-21666690 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 44, 183

Conread position: 154-486
Cow position: chr15:6387308-6386966 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 229
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 42

Conread position: 154-488
Cow position: chr15:24793055-24793386 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 80

Conread position: 154-502
Cow position: chr15:32680570-32680201 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 237
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 129

Conread position: 156-488
Cow position: chr15:35649206-35648885 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 11

Conread position: 158-375
Cow position: chr15:21960530-21960753 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 45, 177

Conread position: 158-480
Cow position: chr15:53338048-53338384 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 217
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 260

Conread position: 158-502
Cow position: chr15:370685-370321 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 158-502
Cow position: chr15:10788083-10787746 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 225
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 159

Conread position: 164-502
Cow position: chr15:35734468-35734808 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 226
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 48

Conread position: 174-485
Cow position: chr15:6156949-6156634 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 208
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 164

Conread position: 174-488
Cow position: chr15:7933003-7933307 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 76

Conread position: 208-502
Cow position: chr15:685211-685508 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 41

Conread position: 285-501
Cow position: chr15:17788013-17787802 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 39

Conread position: 285-502
Cow position: chr15:17683069-17682852 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 28

Conread position: 361-502
Cow position: chr15:3902963-3903108 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.