Cow genome map
| Conread name: | rtes07_h2r1.y1 |
| Conread position: | 1-502 |
| Cow position: | chr16:9929072-9929552 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 326 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 126, 55 |
| Conread position: | 1-502 |
| Cow position: | chr16:29981761-29982273 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 1-502 |
| Cow position: | chr16:44964552-44965046 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 51 |
| Conread position: | 10-372 |
| Cow position: | chr16:52816559-52816181 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 74 |
| Conread position: | 10-485 |
| Cow position: | chr16:5588701-5589180 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 48 |
| Conread position: | 10-501 |
| Cow position: | chr16:16029278-16029761 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 326 |
| Conread position: | 10-502 |
| Cow position: | chr16:14422237-14422713 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 6 |
| Conread position: | 12-198 |
| Cow position: | chr16:31717455-31717268 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 12-354 |
| Cow position: | chr16:44389027-44388678 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 110, 132 |
| Conread position: | 12-399 |
| Cow position: | chr16:49956006-49955622 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 140 |
| Conread position: | 12-484 |
| Cow position: | chr16:334510-334968 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 22 |
| Conread position: | 12-502 |
| Cow position: | chr16:5647750-5648236 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 16 |
| Conread position: | 20-370 |
| Cow position: | chr16:13650886-13650530 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 87 |
| Conread position: | 22-502 |
| Cow position: | chr16:36233086-36232601 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 78 |
| Conread position: | 40-183 |
| Cow position: | chr16:20753295-20753159 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 43 |
| Conread position: | 45-368 |
| Cow position: | chr16:47561967-47562285 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 56, 210 |
| Conread position: | 62-256 |
| Cow position: | chr16:45568420-45568617 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 81-501 |
| Cow position: | chr16:51685027-51685445 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 81-502 |
| Cow position: | chr16:32934712-32935145 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 84-500 |
| Cow position: | chr16:40887673-40887267 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 91-374 |
| Cow position: | chr16:18209260-18208971 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 239 |
| Conread position: | 92-500 |
| Cow position: | chr16:55112265-55111849 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 146-502 |
| Cow position: | chr16:29031556-29031913 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 57, 262 |
| Conread position: | 150-502 |
| Cow position: | chr16:49236473-49236116 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 111, 236 |
| Conread position: | 158-315 |
| Cow position: | chr16:28234002-28233850 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 158-502 |
| Cow position: | chr16:19714185-19713851 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 164 |
| Conread position: | 174-488 |
| Cow position: | chr16:2484471-2484154 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 174-502 |
| Cow position: | chr16:16687536-16687864 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 237 |
| Conread position: | 175-502 |
| Cow position: | chr16:39818302-39818621 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 150 |
| Conread position: | 193-502 |
| Cow position: | chr16:54647030-54647329 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 11, 136 |
| Conread position: | 334-502 |
| Cow position: | chr16:31376392-31376230 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.