Cow genome map


           Conread name:
           rtes07_h2r1.y1
        

               Conread position:
               7-501
               

               Cow position:
               chr18:29762767-29763266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 15
               

               Conread position:
               10-300
               

               Cow position:
               chr18:42072812-42072515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 89
               

               Conread position:
               11-398
               

               Cow position:
               chr18:16876551-16876926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 67
               

               Conread position:
               12-488
               

               Cow position:
               chr18:43200081-43200561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 153
               

               Conread position:
               16-302
               

               Cow position:
               chr18:5979942-5980230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               18-376
               

               Cow position:
               chr18:18896860-18897220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               31-488
               

               Cow position:
               chr18:35287580-35288028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               324
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               91, 67
               

               Conread position:
               31-502
               

               Cow position:
               chr18:45958006-45958482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 344
               

               Conread position:
               60-289
               

               Cow position:
               chr18:2887669-2887440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 32
               

               Conread position:
               204-501
               

               Cow position:
               chr18:54268052-54268337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               238-502
               

               Cow position:
               chr18:51480358-51480621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               24, 102
               

               Conread position:
               251-501
               

               Cow position:
               chr18:42245014-42244769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 117
               
Show alignments to all cow chromosomes.