Cow genome map
| Conread name: | rtes07_h2r1.y1 |
| Conread position: | 1-269 |
| Cow position: | chr2:769631-769362 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 75, 87 |
| Conread position: | 1-502 |
| Cow position: | chr2:7210157-7210658 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 147 |
| Conread position: | 3-502 |
| Cow position: | chr2:73190588-73191068 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 268 |
| Conread position: | 7-237 |
| Cow position: | chr2:74392775-74392544 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 114, 22 |
| Conread position: | 10-500 |
| Cow position: | chr2:46466747-46466271 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 58 |
| Conread position: | 12-201 |
| Cow position: | chr2:32434952-32434763 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 12-502 |
| Cow position: | chr2:42334524-42334039 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 22 |
| Conread position: | 13-498 |
| Cow position: | chr2:20904371-20903899 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 51 |
| Conread position: | 13-502 |
| Cow position: | chr2:85069506-85069009 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 18-398 |
| Cow position: | chr2:3438827-3439197 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 57 |
| Conread position: | 20-183 |
| Cow position: | chr2:37791750-37791592 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 100, 130 |
| Conread position: | 32-486 |
| Cow position: | chr2:54650028-54649588 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 322 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 90, 131 |
| Conread position: | 34-498 |
| Cow position: | chr2:75677103-75676641 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 35-502 |
| Cow position: | chr2:28746282-28746723 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 38 |
| Conread position: | 41-500 |
| Cow position: | chr2:32388322-32388794 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 376 |
| Conread position: | 58-502 |
| Cow position: | chr2:782951-782501 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 114 |
| Conread position: | 63-426 |
| Cow position: | chr2:25244162-25244527 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 63, 85 |
| Conread position: | 78-502 |
| Cow position: | chr2:63293766-63293346 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 93 |
| Conread position: | 91-370 |
| Cow position: | chr2:3446491-3446777 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 91-502 |
| Cow position: | chr2:3729562-3729968 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 222 |
| Conread position: | 101-501 |
| Cow position: | chr2:50321134-50321525 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 105-501 |
| Cow position: | chr2:38589014-38589412 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 108-259 |
| Cow position: | chr2:3837738-3837591 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 145-488 |
| Cow position: | chr2:7900925-7901286 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 8, 272 |
| Conread position: | 150-502 |
| Cow position: | chr2:202787-202416 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 266 |
| Conread position: | 151-488 |
| Cow position: | chr2:36032192-36031843 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 265 |
| Conread position: | 154-502 |
| Cow position: | chr2:16288125-16288483 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 49, 260 |
| Conread position: | 154-502 |
| Cow position: | chr2:44992408-44992052 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 157-502 |
| Cow position: | chr2:8117120-8117468 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 177 |
| Conread position: | 160-502 |
| Cow position: | chr2:2102561-2102225 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 165 |
| Conread position: | 167-488 |
| Cow position: | chr2:75250681-75250986 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 167-502 |
| Cow position: | chr2:32459126-32458782 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 36, 135 |
| Conread position: | 168-488 |
| Cow position: | chr2:1673754-1673433 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 133 |
| Conread position: | 172-488 |
| Cow position: | chr2:6959637-6959959 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 241 |
| Conread position: | 172-493 |
| Cow position: | chr2:22076686-22077013 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 174-500 |
| Cow position: | chr2:6877397-6877721 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 174-502 |
| Cow position: | chr2:28651328-28650997 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 226-502 |
| Cow position: | chr2:74392417-74392137 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 262-473 |
| Cow position: | chr2:30388238-30388439 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 301-500 |
| Cow position: | chr2:769354-769156 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 153, 40 |
Show alignments to all cow chromosomes.