Cow genome map
| Conread name: | rtes07_h2r1.y1 |
| Conread position: | 1-335 |
| Cow position: | chr3:14587446-14587768 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 1-362 |
| Cow position: | chr3:44257037-44256691 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 157 |
| Conread position: | 1-502 |
| Cow position: | chr3:14755383-14754873 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 173 |
| Conread position: | 2-502 |
| Cow position: | chr3:18357753-18357259 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 39 |
| Conread position: | 10-310 |
| Cow position: | chr3:60211011-60210710 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 19 |
| Conread position: | 10-335 |
| Cow position: | chr3:26948450-26948785 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 10-374 |
| Cow position: | chr3:56096720-56097073 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 191, 104 |
| Conread position: | 12-256 |
| Cow position: | chr3:17751374-17751606 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 105, 159 |
| Conread position: | 12-398 |
| Cow position: | chr3:54865586-54865190 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 105 |
| Conread position: | 12-501 |
| Cow position: | chr3:45775931-45775452 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 12-502 |
| Cow position: | chr3:15177445-15177942 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 66 |
| Conread position: | 12-502 |
| Cow position: | chr3:30928814-30929296 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 169 |
| Conread position: | 12-502 |
| Cow position: | chr3:36099585-36099091 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 16 |
| Conread position: | 13-502 |
| Cow position: | chr3:83701003-83700521 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 116 |
| Conread position: | 16-485 |
| Cow position: | chr3:32843298-32842825 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 16-492 |
| Cow position: | chr3:58208949-58208483 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 17-502 |
| Cow position: | chr3:52861006-52861489 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 338 |
| Conread position: | 23-502 |
| Cow position: | chr3:80870874-80871352 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 273 |
| Conread position: | 45-374 |
| Cow position: | chr3:65584436-65584103 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 74, 111 |
| Conread position: | 52-498 |
| Cow position: | chr3:34094229-34093777 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 306 |
| Conread position: | 58-342 |
| Cow position: | chr3:50011585-50011871 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 58-487 |
| Cow position: | chr3:3979571-3979990 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 178 |
| Conread position: | 58-488 |
| Cow position: | chr3:64359002-64358561 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 359 |
| Conread position: | 60-397 |
| Cow position: | chr3:27906098-27905755 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 74-278 |
| Cow position: | chr3:54350706-54350499 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 135, 116 |
| Conread position: | 81-499 |
| Cow position: | chr3:19692891-19692464 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 196 |
| Conread position: | 113-502 |
| Cow position: | chr3:21946180-21945789 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 235 |
| Conread position: | 136-473 |
| Cow position: | chr3:54782810-54783154 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 138-501 |
| Cow position: | chr3:49309408-49309058 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 107 |
| Conread position: | 140-502 |
| Cow position: | chr3:24592357-24591993 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 171 |
| Conread position: | 141-501 |
| Cow position: | chr3:13277989-13277623 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 60, 120 |
| Conread position: | 146-488 |
| Cow position: | chr3:6684713-6685055 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 8, 198 |
| Conread position: | 146-502 |
| Cow position: | chr3:19801676-19802041 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 151-502 |
| Cow position: | chr3:5882804-5883157 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 154-502 |
| Cow position: | chr3:3053889-3054229 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 158-502 |
| Cow position: | chr3:39325969-39326308 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 164-502 |
| Cow position: | chr3:78028135-78027794 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 180 |
| Conread position: | 266-502 |
| Cow position: | chr3:30313944-30314177 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 57, 72 |
Show alignments to all cow chromosomes.