Cow genome map
| Conread name: | rtes07_h2r1.y1 |
| Conread position: | 1-206 |
| Cow position: | chr6:42360418-42360216 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 200, 160 |
| Conread position: | 1-500 |
| Cow position: | chr6:37477388-37477897 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 163 |
| Conread position: | 1-502 |
| Cow position: | chr6:52803597-52804081 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 185 |
| Conread position: | 10-372 |
| Cow position: | chr6:34202731-34203079 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 20 |
| Conread position: | 12-319 |
| Cow position: | chr6:59742048-59741756 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 52 |
| Conread position: | 12-498 |
| Cow position: | chr6:66194806-66194321 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 80 |
| Conread position: | 13-157 |
| Cow position: | chr6:10053777-10053925 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 16-380 |
| Cow position: | chr6:16622375-16622735 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 16-488 |
| Cow position: | chr6:66538499-66538970 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 44 |
| Conread position: | 43-474 |
| Cow position: | chr6:51584804-51584367 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 204 |
| Conread position: | 50-502 |
| Cow position: | chr6:7180457-7180007 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 313 |
| Conread position: | 88-289 |
| Cow position: | chr6:49946831-49946621 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 163 |
| Conread position: | 91-363 |
| Cow position: | chr6:60511690-60511967 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 104-501 |
| Cow position: | chr6:62489469-62489054 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 151 |
| Conread position: | 139-459 |
| Cow position: | chr6:10053934-10054239 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 68, 30 |
| Conread position: | 147-502 |
| Cow position: | chr6:3890185-3889829 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 150-468 |
| Cow position: | chr6:40555308-40554986 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 256 |
| Conread position: | 150-502 |
| Cow position: | chr6:15281241-15280885 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 25, 195 |
| Conread position: | 150-502 |
| Cow position: | chr6:21970980-21971331 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 185 |
| Conread position: | 168-502 |
| Cow position: | chr6:38231587-38231937 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 252 |
| Conread position: | 174-488 |
| Cow position: | chr6:65840915-65841233 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 171 |
| Conread position: | 174-502 |
| Cow position: | chr6:28274319-28274646 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 213 |
| Conread position: | 178-488 |
| Cow position: | chr6:28508964-28509276 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 238-485 |
| Cow position: | chr6:52735790-52736045 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 172 |
| Conread position: | 243-501 |
| Cow position: | chr6:17100504-17100246 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 262-467 |
| Cow position: | chr6:48367856-48368052 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 275-492 |
| Cow position: | chr6:51189982-51190195 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 83, 127 |
| Conread position: | 306-498 |
| Cow position: | chr6:59741554-59741371 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 307-500 |
| Cow position: | chr6:42360196-42360013 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 317-501 |
| Cow position: | chr6:1384366-1384185 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 143, 84 |
| Conread position: | 332-502 |
| Cow position: | chr6:1101307-1101149 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 335-488 |
| Cow position: | chr6:2885740-2885889 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.