Cow genome map
| Conread name: | rtes07_h2r1.y1 |
| Conread position: | 1-341 |
| Cow position: | chr9:23400731-23401073 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 114, 27 |
| Conread position: | 1-487 |
| Cow position: | chr9:20310623-20310143 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 9 |
| Conread position: | 10-398 |
| Cow position: | chr9:26103487-26103104 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 10-487 |
| Cow position: | chr9:2051576-2052032 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 146 |
| Conread position: | 12-267 |
| Cow position: | chr9:6973183-6973443 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 12-353 |
| Cow position: | chr9:52569533-52569877 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 16 |
| Conread position: | 12-354 |
| Cow position: | chr9:2196084-2196419 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 12-364 |
| Cow position: | chr9:18835824-18836177 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 91 |
| Conread position: | 12-382 |
| Cow position: | chr9:10318610-10318988 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 140 |
| Conread position: | 13-322 |
| Cow position: | chr9:8167122-8166802 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 166 |
| Conread position: | 13-455 |
| Cow position: | chr9:26237225-26237653 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 15-419 |
| Cow position: | chr9:34107758-34107348 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 34 |
| Conread position: | 18-484 |
| Cow position: | chr9:26713180-26712720 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 60 |
| Conread position: | 19-284 |
| Cow position: | chr9:3579983-3579714 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 214 |
| Conread position: | 19-501 |
| Cow position: | chr9:4027986-4027497 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 27-502 |
| Cow position: | chr9:6756678-6757157 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 113 |
| Conread position: | 33-177 |
| Cow position: | chr9:35885310-35885455 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 33-451 |
| Cow position: | chr9:6111805-6111402 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 67 |
| Conread position: | 34-501 |
| Cow position: | chr9:31776076-31776538 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 119 |
| Conread position: | 35-502 |
| Cow position: | chr9:64117988-64118431 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 128 |
| Conread position: | 58-455 |
| Cow position: | chr9:13219507-13219888 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 69-502 |
| Cow position: | chr9:59424897-59425299 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 300 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 134, 52 |
| Conread position: | 74-288 |
| Cow position: | chr9:240919-240701 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 84-501 |
| Cow position: | chr9:14962264-14961843 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 280 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 88-321 |
| Cow position: | chr9:5425567-5425332 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 88-501 |
| Cow position: | chr9:52289799-52290226 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 355 |
| Conread position: | 91-455 |
| Cow position: | chr9:35657167-35657528 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 92-492 |
| Cow position: | chr9:9563502-9563107 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 57 |
| Conread position: | 130-502 |
| Cow position: | chr9:8969823-8969456 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 184 |
| Conread position: | 136-289 |
| Cow position: | chr9:28002389-28002549 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 147-323 |
| Cow position: | chr9:17527519-17527333 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 158-315 |
| Cow position: | chr9:3802756-3802914 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 160-501 |
| Cow position: | chr9:42904431-42904090 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 172-421 |
| Cow position: | chr9:22650178-22650430 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 163 |
| Conread position: | 172-488 |
| Cow position: | chr9:18510469-18510151 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 117 |
| Conread position: | 174-488 |
| Cow position: | chr9:9012366-9012681 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 168 |
| Conread position: | 250-500 |
| Cow position: | chr9:39992271-39992527 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 162 |
| Conread position: | 271-502 |
| Cow position: | chr9:3579598-3579376 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 174, 76 |
| Conread position: | 271-502 |
| Cow position: | chr9:6973532-6973751 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 224, 37 |
Show alignments to all cow chromosomes.