Cow genome map
| Conread name: | rtes07_h2r1.y1 |
| Conread position: | 1-440 |
| Cow position: | chrX:13051676-13052116 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 160 |
| Conread position: | 1-502 |
| Cow position: | chrX:21271180-21270673 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 10 |
| Conread position: | 10-502 |
| Cow position: | chrX:31079536-31080028 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 208 |
| Conread position: | 11-500 |
| Cow position: | chrX:34987663-34988136 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 12-243 |
| Cow position: | chrX:20699403-20699168 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 12-502 |
| Cow position: | chrX:2142317-2142806 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 165 |
| Conread position: | 12-502 |
| Cow position: | chrX:12998566-12998092 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 38 |
| Conread position: | 13-502 |
| Cow position: | chrX:19185938-19185451 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 324 |
| Conread position: | 16-502 |
| Cow position: | chrX:24376372-24376866 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 143 |
| Conread position: | 16-502 |
| Cow position: | chrX:30369972-30369480 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 147 |
| Conread position: | 28-502 |
| Cow position: | chrX:22131684-22131194 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 365 |
| Conread position: | 58-399 |
| Cow position: | chrX:17669358-17669011 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 257 |
| Conread position: | 81-501 |
| Cow position: | chrX:24139905-24139486 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 6, 16 |
| Conread position: | 85-501 |
| Cow position: | chrX:6887256-6886862 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 88-501 |
| Cow position: | chrX:22894295-22893869 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 328 |
| Conread position: | 91-353 |
| Cow position: | chrX:24175718-24175453 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 91-375 |
| Cow position: | chrX:31885113-31884833 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 118, 45 |
| Conread position: | 94-374 |
| Cow position: | chrX:21316265-21316540 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 137-502 |
| Cow position: | chrX:23456437-23456078 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 142-319 |
| Cow position: | chrX:12974534-12974351 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 142-502 |
| Cow position: | chrX:28549029-28549396 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 267 |
| Conread position: | 149-374 |
| Cow position: | chrX:17887732-17887958 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 60, 34 |
| Conread position: | 149-500 |
| Cow position: | chrX:2788077-2787722 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 100 |
| Conread position: | 154-312 |
| Cow position: | chrX:31034837-31035001 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 156-319 |
| Cow position: | chrX:31372099-31372268 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 158-485 |
| Cow position: | chrX:29283878-29284211 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 252 |
| Conread position: | 162-502 |
| Cow position: | chrX:30710509-30710847 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 164-501 |
| Cow position: | chrX:19927464-19927805 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 242 |
| Conread position: | 171-500 |
| Cow position: | chrX:31192601-31192269 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 172-502 |
| Cow position: | chrX:15128080-15127750 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 238-501 |
| Cow position: | chrX:20699036-20698771 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 262-500 |
| Cow position: | chrX:37757055-37757280 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 273-502 |
| Cow position: | chrX:18532262-18532498 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 49, 138 |
| Conread position: | 276-502 |
| Cow position: | chrX:18955245-18955022 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 62 |
Show alignments to all cow chromosomes.