Cow genome map
| Conread name: | rthg05_i6.y1 |
| Conread position: | 4-305 |
| Cow position: | chr1:79286387-79286677 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 115, 31 |
| Conread position: | 9-382 |
| Cow position: | chr1:60426800-60426435 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 177, 43 |
| Conread position: | 12-258 |
| Cow position: | chr1:26574981-26574746 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 173, 52 |
| Conread position: | 12-280 |
| Cow position: | chr1:26743523-26743266 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 173, 37 |
| Conread position: | 13-316 |
| Cow position: | chr1:85712892-85713185 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 299, 42 |
| Conread position: | 55-384 |
| Cow position: | chr1:93744858-93745181 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 68, 49 |
| Conread position: | 57-343 |
| Cow position: | chr1:28676761-28677040 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 228, 11 |
| Conread position: | 66-489 |
| Cow position: | chr1:73642694-73643109 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 68-387 |
| Cow position: | chr1:48695270-48694962 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 43 |
| Conread position: | 68-388 |
| Cow position: | chr1:33364287-33363966 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 119, 154 |
| Conread position: | 68-388 |
| Cow position: | chr1:92034783-92035101 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 119, 168 |
| Conread position: | 68-400 |
| Cow position: | chr1:61343030-61342696 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 146 |
| Conread position: | 68-403 |
| Cow position: | chr1:30649493-30649165 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 117, 60 |
| Conread position: | 68-418 |
| Cow position: | chr1:91901705-91902051 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 68-444 |
| Cow position: | chr1:49605755-49606128 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 55, 51 |
| Conread position: | 68-490 |
| Cow position: | chr1:53251218-53250803 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 287 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 215, 93 |
| Conread position: | 75-351 |
| Cow position: | chr1:83977255-83977523 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 209, 26 |
| Conread position: | 75-485 |
| Cow position: | chr1:61562726-61563141 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 110, 138 |
| Conread position: | 78-419 |
| Cow position: | chr1:56424603-56424944 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 107, 136 |
| Conread position: | 85-453 |
| Cow position: | chr1:73064635-73064266 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 100, 128 |
| Conread position: | 90-486 |
| Cow position: | chr1:79987907-79988299 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 105-359 |
| Cow position: | chr1:94496536-94496275 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 107-418 |
| Cow position: | chr1:78922289-78921981 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 113 |
| Conread position: | 110-359 |
| Cow position: | chr1:50421324-50421070 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 170, 75 |
| Conread position: | 113-453 |
| Cow position: | chr1:37677429-37677089 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 68, 109 |
| Conread position: | 117-395 |
| Cow position: | chr1:87738226-87738510 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 131-418 |
| Cow position: | chr1:79553244-79553527 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 184, 44 |
Show alignments to all cow chromosomes.