Cow genome map
| Conread name: | rthg05_i6.y1 |
| Conread position: | 6-378 |
| Cow position: | chr13:3183149-3183513 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 180, 18 |
| Conread position: | 12-286 |
| Cow position: | chr13:44149725-44149986 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 173, 48 |
| Conread position: | 13-453 |
| Cow position: | chr13:18122500-18122063 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 172, 32 |
| Conread position: | 13-489 |
| Cow position: | chr13:15883471-15883001 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 306 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 172, 51 |
| Conread position: | 15-484 |
| Cow position: | chr13:393755-393298 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 171, 43 |
| Conread position: | 57-485 |
| Cow position: | chr13:46462071-46462491 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 126, 7 |
| Conread position: | 68-453 |
| Cow position: | chr13:21586967-21587345 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 117, 149 |
| Conread position: | 68-453 |
| Cow position: | chr13:49976089-49976477 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 117, 154 |
| Conread position: | 68-471 |
| Cow position: | chr13:34039920-34039513 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 107 |
| Conread position: | 68-490 |
| Cow position: | chr13:19637566-19638000 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 75-402 |
| Cow position: | chr13:34095486-34095161 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 186, 110 |
| Conread position: | 75-451 |
| Cow position: | chr13:60443090-60443453 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 205, 32 |
| Conread position: | 75-471 |
| Cow position: | chr13:32549187-32549588 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 138 |
| Conread position: | 106-452 |
| Cow position: | chr13:38624695-38625024 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 111-444 |
| Cow position: | chr13:34088789-34089121 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 134-316 |
| Cow position: | chr13:569806-569986 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 143-382 |
| Cow position: | chr13:30148806-30149046 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 136, 147 |
| Conread position: | 235-486 |
| Cow position: | chr13:58843299-58843557 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 172 |
Show alignments to all cow chromosomes.