Cow genome map
| Conread name: | rthg05_i6.y1 |
| Conread position: | 9-376 |
| Cow position: | chr16:25886156-25886512 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 189, 43 |
| Conread position: | 12-310 |
| Cow position: | chr16:13378152-13378441 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 127, 10 |
| Conread position: | 12-324 |
| Cow position: | chr16:46529736-46529408 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 20, 237 |
| Conread position: | 13-401 |
| Cow position: | chr16:22852899-22853270 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 172, 51 |
| Conread position: | 13-453 |
| Cow position: | chr16:23719500-23719071 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 291 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 271, 20 |
| Conread position: | 16-388 |
| Cow position: | chr16:25180528-25180880 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 169, 9 |
| Conread position: | 23-379 |
| Cow position: | chr16:49766967-49767309 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 68-400 |
| Cow position: | chr16:12535990-12535659 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 68-402 |
| Cow position: | chr16:5663741-5664072 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 118, 16 |
| Conread position: | 68-418 |
| Cow position: | chr16:5526159-5525808 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 108, 94 |
| Conread position: | 68-418 |
| Cow position: | chr16:24406862-24407206 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 68-418 |
| Cow position: | chr16:56861256-56861606 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 119, 168 |
| Conread position: | 68-444 |
| Cow position: | chr16:1565730-1565354 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 145 |
| Conread position: | 68-453 |
| Cow position: | chr16:13539478-13539091 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 119, 168 |
| Conread position: | 68-453 |
| Cow position: | chr16:17111198-17111585 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 151 |
| Conread position: | 68-453 |
| Cow position: | chr16:24621751-24621364 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 117, 166 |
| Conread position: | 68-485 |
| Cow position: | chr16:15980439-15980010 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 343 |
| Conread position: | 68-490 |
| Cow position: | chr16:416842-417268 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 117, 82 |
| Conread position: | 68-490 |
| Cow position: | chr16:3770064-3769637 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 145 |
| Conread position: | 68-490 |
| Cow position: | chr16:8814154-8813729 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 113, 166 |
| Conread position: | 68-490 |
| Cow position: | chr16:37478914-37478487 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 144 |
| Conread position: | 69-486 |
| Cow position: | chr16:54698777-54699183 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 74-313 |
| Cow position: | chr16:32741330-32741567 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 116, 158 |
| Conread position: | 75-444 |
| Cow position: | chr16:14352727-14352359 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 138 |
| Conread position: | 75-454 |
| Cow position: | chr16:52627325-52627685 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 46 |
| Conread position: | 75-490 |
| Cow position: | chr16:25343929-25344351 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 109, 140 |
| Conread position: | 82-479 |
| Cow position: | chr16:3346198-3345808 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 105-480 |
| Cow position: | chr16:15538427-15538805 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 80, 112 |
| Conread position: | 141-381 |
| Cow position: | chr16:3593845-3593604 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 83 |
Show alignments to all cow chromosomes.