Cow genome map
| Conread name: | rthg05_i6.y1 |
| Conread position: | 4-400 |
| Cow position: | chr21:47972391-47971996 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 100, 9 |
| Conread position: | 6-486 |
| Cow position: | chr21:12910887-12911370 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 6-506 |
| Cow position: | chr21:37085896-37086391 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 331 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 176, 54 |
| Conread position: | 12-382 |
| Cow position: | chr21:42453682-42454044 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 174, 40 |
| Conread position: | 12-490 |
| Cow position: | chr21:30872517-30872979 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 171, 40 |
| Conread position: | 15-285 |
| Cow position: | chr21:45455944-45456205 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 170, 27 |
| Conread position: | 59-384 |
| Cow position: | chr21:21173748-21174065 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 126, 32 |
| Conread position: | 68-282 |
| Cow position: | chr21:36651593-36651801 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 117, 48 |
| Conread position: | 68-306 |
| Cow position: | chr21:34551070-34550835 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 68-316 |
| Cow position: | chr21:44874590-44874350 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 216, 36 |
| Conread position: | 68-418 |
| Cow position: | chr21:39428211-39428560 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 106, 133 |
| Conread position: | 68-419 |
| Cow position: | chr21:23340869-23340518 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 119, 168 |
| Conread position: | 68-453 |
| Cow position: | chr21:30056896-30056509 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 119, 168 |
| Conread position: | 73-396 |
| Cow position: | chr21:45640484-45640173 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 78-402 |
| Cow position: | chr21:31506604-31506278 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 78-407 |
| Cow position: | chr21:3781595-3781925 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 161 |
| Conread position: | 78-490 |
| Cow position: | chr21:5019964-5020381 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 135 |
| Conread position: | 100-326 |
| Cow position: | chr21:46391864-46391643 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 87 |
Show alignments to all cow chromosomes.