Cow genome map


           Conread name:
           rthg05_i6.y1
        

               Conread position:
               4-402
               

               Cow position:
               chr29:5398883-5399270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               179, 9
               

               Conread position:
               12-418
               

               Cow position:
               chr29:22990872-22990475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               173, 48
               

               Conread position:
               17-287
               

               Cow position:
               chr29:321826-321558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               170, 74
               

               Conread position:
               68-388
               

               Cow position:
               chr29:40293978-40294299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               106, 154
               

               Conread position:
               68-453
               

               Cow position:
               chr29:45814-45428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               112, 145
               

               Conread position:
               76-277
               

               Cow position:
               chr29:30463103-30463302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               107, 52
               

               Conread position:
               76-418
               

               Cow position:
               chr29:44404370-44404699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               109, 8
               

               Conread position:
               76-490
               

               Cow position:
               chr29:28710818-28710406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               96, 40
               

               Conread position:
               78-480
               

               Cow position:
               chr29:23979367-23979774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               107, 135
               

               Conread position:
               92-453
               

               Cow position:
               chr29:22745571-22745933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               93, 51
               

               Conread position:
               93-487
               

               Cow position:
               chr29:2417581-2417191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               92, 140
               

               Conread position:
               141-439
               

               Cow position:
               chr29:43303325-43303626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               26, 20
               
Show alignments to all cow chromosomes.