Cow genome map
| Conread name: | rthg05_i6.y1 |
| Conread position: | 4-490 |
| Cow position: | chr3:33759910-33759445 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 318 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 100, 9 |
| Conread position: | 5-438 |
| Cow position: | chr3:33707121-33707540 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 279, 8 |
| Conread position: | 12-396 |
| Cow position: | chr3:58103099-58103473 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 173, 52 |
| Conread position: | 12-402 |
| Cow position: | chr3:43482292-43482674 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 266 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 121, 34 |
| Conread position: | 13-281 |
| Cow position: | chr3:65920353-65920608 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 158, 39 |
| Conread position: | 13-387 |
| Cow position: | chr3:69434509-69434138 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 110, 52 |
| Conread position: | 13-403 |
| Cow position: | chr3:25998623-25998235 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 172, 51 |
| Conread position: | 20-394 |
| Cow position: | chr3:66411717-66411355 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 165, 41 |
| Conread position: | 57-316 |
| Cow position: | chr3:78905956-78905699 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 68-453 |
| Cow position: | chr3:43190710-43190323 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 117, 145 |
| Conread position: | 68-490 |
| Cow position: | chr3:53880707-53880280 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 283 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 117, 152 |
| Conread position: | 68-490 |
| Cow position: | chr3:56645771-56645344 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 112, 166 |
| Conread position: | 68-490 |
| Cow position: | chr3:59864115-59864541 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 117, 145 |
| Conread position: | 68-490 |
| Cow position: | chr3:66028009-66028417 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 273 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 169, 17 |
| Conread position: | 68-490 |
| Cow position: | chr3:71513262-71512848 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 117, 80 |
| Conread position: | 70-474 |
| Cow position: | chr3:62837407-62836993 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 76-376 |
| Cow position: | chr3:36000117-36000410 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 192, 8 |
| Conread position: | 78-402 |
| Cow position: | chr3:24263262-24262933 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 84, 143 |
| Conread position: | 82-400 |
| Cow position: | chr3:31418106-31418428 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 82-418 |
| Cow position: | chr3:38886755-38887088 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 122 |
| Conread position: | 84-453 |
| Cow position: | chr3:5886073-5886446 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 131 |
| Conread position: | 117-402 |
| Cow position: | chr3:50907902-50908192 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 68, 99 |
| Conread position: | 127-490 |
| Cow position: | chr3:73637900-73638266 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 141-395 |
| Cow position: | chr3:4810786-4811031 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 94 |
| Conread position: | 162-490 |
| Cow position: | chr3:43230306-43230633 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 177-442 |
| Cow position: | chr3:53908268-53908006 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 47 |
Show alignments to all cow chromosomes.