Cow genome map
| Conread name: | rthg05_i6.y1 |
| Conread position: | 12-490 |
| Cow position: | chr4:49827351-49827809 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 262, 29 |
| Conread position: | 20-300 |
| Cow position: | chr4:29320185-29319909 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 109, 27 |
| Conread position: | 35-281 |
| Cow position: | chr4:20889886-20889647 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 64-371 |
| Cow position: | chr4:43657247-43657546 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 16 |
| Conread position: | 68-346 |
| Cow position: | chr4:51958983-51959255 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 117, 17 |
| Conread position: | 68-453 |
| Cow position: | chr4:27519007-27518620 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 106, 168 |
| Conread position: | 68-453 |
| Cow position: | chr4:30578092-30578479 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 119, 168 |
| Conread position: | 68-453 |
| Cow position: | chr4:56014249-56013862 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 119, 154 |
| Conread position: | 68-490 |
| Cow position: | chr4:358249-358677 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 112, 145 |
| Conread position: | 72-485 |
| Cow position: | chr4:26626214-26625802 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 113, 29 |
| Conread position: | 75-403 |
| Cow position: | chr4:50871205-50870869 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 110, 16 |
| Conread position: | 75-490 |
| Cow position: | chr4:36026898-36026478 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 110, 164 |
| Conread position: | 78-490 |
| Cow position: | chr4:43317274-43316857 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 107, 161 |
| Conread position: | 85-418 |
| Cow position: | chr4:54036319-54036654 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 15, 139 |
| Conread position: | 87-485 |
| Cow position: | chr4:33070457-33070054 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 93, 166 |
| Conread position: | 89-453 |
| Cow position: | chr4:58882992-58882633 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 91, 44 |
| Conread position: | 91-490 |
| Cow position: | chr4:59558051-59557664 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 94, 90 |
| Conread position: | 128-314 |
| Cow position: | chr4:49419915-49419732 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 108 |
| Conread position: | 129-384 |
| Cow position: | chr4:23049448-23049199 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 131-452 |
| Cow position: | chr4:44381165-44380839 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 87 |
Show alignments to all cow chromosomes.