Cow genome map
| Conread name: | rthg05_i6.y1 |
| Conread position: | 4-481 |
| Cow position: | chr5:56960967-56961438 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 315 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 6-388 |
| Cow position: | chr5:74475661-74476034 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 6-448 |
| Cow position: | chr5:20553016-20552575 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 179, 7 |
| Conread position: | 12-395 |
| Cow position: | chr5:7678653-7679040 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 173, 28 |
| Conread position: | 12-485 |
| Cow position: | chr5:53944246-53944715 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 315 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 173, 34 |
| Conread position: | 13-208 |
| Cow position: | chr5:67621641-67621832 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 172, 51 |
| Conread position: | 57-399 |
| Cow position: | chr5:5392234-5392576 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 67-451 |
| Cow position: | chr5:53150574-53150192 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 68-287 |
| Cow position: | chr5:18580965-18581179 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 117, 53 |
| Conread position: | 68-418 |
| Cow position: | chr5:46778983-46779331 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 218, 153 |
| Conread position: | 68-490 |
| Cow position: | chr5:7276299-7276725 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 108, 100 |
| Conread position: | 73-326 |
| Cow position: | chr5:68256068-68255818 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 75-303 |
| Cow position: | chr5:66981649-66981871 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 36 |
| Conread position: | 75-418 |
| Cow position: | chr5:11153986-11153643 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 112, 146 |
| Conread position: | 78-456 |
| Cow position: | chr5:25929214-25928845 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 107, 161 |
| Conread position: | 83-485 |
| Cow position: | chr5:58771389-58770982 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 97, 130 |
| Conread position: | 84-490 |
| Cow position: | chr5:6152344-6151940 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 108-403 |
| Cow position: | chr5:46003144-46002848 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 105 |
| Conread position: | 128-453 |
| Cow position: | chr5:68484945-68485267 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 88 |
| Conread position: | 179-462 |
| Cow position: | chr5:40225665-40225936 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 8, 54 |
Show alignments to all cow chromosomes.