Cow genome map


           Conread name:
           rthg15_e22.y1
        

               Conread position:
               10-316
               

               Cow position:
               chr16:53271428-53271731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 40
               

               Conread position:
               21-482
               

               Cow position:
               chr16:48912300-48911838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               304
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               27-381
               

               Cow position:
               chr16:42671743-42672110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               115-489
               

               Cow position:
               chr16:56119825-56120207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               215-482
               

               Cow position:
               chr16:49471925-49472185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               215-509
               

               Cow position:
               chr16:36160725-36161015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 180
               

               Conread position:
               225-423
               

               Cow position:
               chr16:17028012-17027817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               229-504
               

               Cow position:
               chr16:43954524-43954250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               135, 54
               
Show alignments to all cow chromosomes.