Cow genome map
| Conread name: | rthg15_e22.y1 |
| Conread position: | 11-390 |
| Cow position: | chrX:18687062-18686680 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 20-318 |
| Cow position: | chrX:7540638-7540937 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 201, 44 |
| Conread position: | 20-433 |
| Cow position: | chrX:27121260-27120830 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 87 |
| Conread position: | 20-481 |
| Cow position: | chrX:17613475-17613002 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 326 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 21-507 |
| Cow position: | chrX:27344901-27344418 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 334 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 26-524 |
| Cow position: | chrX:23909873-23909390 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 48 |
| Conread position: | 132-509 |
| Cow position: | chrX:18900446-18900044 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 90, 169 |
| Conread position: | 169-549 |
| Cow position: | chrX:16405351-16405721 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 113, 153 |
| Conread position: | 213-425 |
| Cow position: | chrX:1391695-1391903 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 109 |
| Conread position: | 213-437 |
| Cow position: | chrX:13416680-13416458 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 213-497 |
| Cow position: | chrX:4411408-4411687 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 8, 64 |
| Conread position: | 214-425 |
| Cow position: | chrX:18842214-18842009 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 75, 68 |
| Conread position: | 215-508 |
| Cow position: | chrX:26578429-26578721 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 136 |
| Conread position: | 215-545 |
| Cow position: | chrX:24080666-24080986 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 219-424 |
| Cow position: | chrX:27006254-27006455 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 227-402 |
| Cow position: | chrX:35940482-35940310 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 55, 101 |
| Conread position: | 234-421 |
| Cow position: | chrX:38890768-38890951 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 238-509 |
| Cow position: | chrX:18553208-18553482 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 83 |
Show alignments to all cow chromosomes.