Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-350
Cow position:
Alignm length: 356
Alignm identity: 237
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 152, 36

Conread position: 1-431
Cow position:
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 153

Conread position: 12-390
Cow position:
Alignm length: 393
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 15-403
Cow position:
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-423
Cow position:
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-430
Cow position:
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 15-431
Cow position:
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position:
Alignm length: 431
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 47

Conread position: 15-431
Cow position:
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position:
Alignm length: 438
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 22

Conread position: 15-431
Cow position:
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 44

Conread position: 16-431
Cow position:
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 43

Conread position: 18-431
Cow position:
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 33

Conread position: 19-431
Cow position:
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 40

Conread position: 20-431
Cow position:
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 40

Conread position: 37-431
Cow position:
Alignm length: 403
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 43-431
Cow position:
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 14

Conread position: 43-431
Cow position:
Alignm length: 408
Alignm identity: 269
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 17

Conread position: 43-431
Cow position:
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 14

Conread position: 96-236
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 96-398
Cow position:
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 98-305
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 0

Conread position: 99-431
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 61

Conread position: 103-428
Cow position:
Alignm length: 338
Alignm identity: 222
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 59

Conread position: 106-248
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 21

Conread position: 110-326
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 82, 103

Conread position: 110-402
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 49

Conread position: 110-405
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 191

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-431
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 15

Conread position: 112-340
Cow position:
Alignm length: 240
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 112-429
Cow position:
Alignm length: 324
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 32

Conread position: 112-430
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 204

Conread position: 112-430
Cow position:
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 313

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-431
Cow position:
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 112-431
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 226

Conread position: 115-346
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 132

Conread position: 121-401
Cow position:
Alignm length: 286
Alignm identity: 202
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 40

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-431
Cow position:
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 282

Conread position: 121-431
Cow position:
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 38

Conread position: 122-431
Cow position:
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 265

Conread position: 123-427
Cow position:
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 275

Conread position: 125-333
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 125-431
Cow position:
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 129-430
Cow position:
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 259

Conread position: 131-431
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 134-431
Cow position:
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 115

Conread position: 151-431
Cow position:
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 239

Conread position: 168-431
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 10

Conread position: 179-400
Cow position:
Alignm length: 222
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 179-431
Cow position:
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 232-430
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 104

Show alignments to all cow chromosomes.